HHsearch alignment for GI: 254780676 and conserved domain: PRK08599
>PRK08599 coproporphyrinogen III oxidase; Provisional.
Probab=97.54 E-value=0.0057 Score=42.56 Aligned_cols=206 Identities=16% Similarity=0.273 Sum_probs=129.6
Q ss_pred CCCCCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHCCC----EEEEECCCCCCCCCCH------HHHHHHHHHHHHHH
Q ss_conf 522353522344678--99888823579999999970775----1898505445345325------89999999999853
Q gi|254780676|r 94 AICTRACTFCNVATG--KPQPLDPQEPENISWAVRSMKLS----HVVITSVDRDDLDDGG------AQHFAEVISAIRES 161 (329)
Q Consensus 94 ~~CTR~C~FC~V~~G--~P~~~D~~EP~rvA~av~~l~Lk----~vViTSV~RDDL~DgG------A~hfa~~I~~Ir~~ 161 (329)
T Consensus 9 PFC~~~C~yC~f~~~~~~~~~~~----~Y~~aL~~Ei~~~~~~~~~~~~tiy----~GGGTPs~L~~~~l~~ll~~i~~~ 80 (377)
T PRK08599 9 PFCEHICYYCDFNKVFIENQPVD----EYLDALIKEMESTVAKYIRKLKTIY----IGGGTPTALSAEQLERLLNAIHRT 80 (377)
T ss_pred CCCCCCCCCCCCCCCCCCCCCHH----HHHHHHHHHHHHHHHHCCCCEEEEE----ECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 78998689996916468987799----9999999999976551499557999----799810009999999999999997
Q ss_pred CC-----CCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCE-EEECCC
Q ss_conf 35-----868998154623446899987410702332013830-00275638970358999999999970891-670140
Q gi|254780676|r 162 AP-----STTIEVLTPDFLRKPHALEKVVSAKPDVFNHNLETV-ASNYLMVRPGARYFHSLRLLQRVKELDPL-IFTKSG 234 (329)
Q Consensus 162 ~P-----~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiETV-~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~-i~TKSG 234 (329)
T Consensus 81 f~~~~~~EiTiE~nP~~~--~~~~l~~l~~~GvNRiSlGvQsf~~~~l~~lgR~h~~~~~~~~i~~~r~~gf~~in--iD 156 (377)
T PRK08599 81 LPLSDLEEFTFEANPGDL--TKEKLQVLKDYGVNRISLGVQTFNDELLKKIGRTHNEEDVYESIANAKKAGFKNIS--ID 156 (377)
T ss_pred CCCCCCCEEEEEECCCCC--CHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEE--EE
T ss_conf 697767327999551516--39999999970998799965359879999868999899999999999975997411--56
Q ss_pred EEEEE-EECHHHHHHHHHHHHHCCCCEEECCHHC-CC-CCCCCCCC--CCCCH------HHHHHHHHHHHHCCCCEEECC
Q ss_conf 48876-4206889999999996699399750222-78-61007800--02384------699999999997496243404
Q gi|254780676|r 235 IMLGL-GETRNEILQLMDDLRTADVDFLTMGQYL-QP-TRKHHKVE--SFVTP------QDFKSYETIAYSKGFLMVSAS 303 (329)
Q Consensus 235 lMvGL-GEt~eEi~e~l~DLr~~gvdilTiGQYL-~P-s~~h~pV~--ryv~P------~eF~~~~~~a~~~Gf~~V~Sg 303 (329)
T Consensus 157 LIyGlP~Qt~~~~~~~l~~~~~l~p~hiS~Y~L~ie~~t~~~~~~~~g~~~lp~~d~~~~m~~~~~~~L~~~Gy~~yeis 236 (377)
T PRK08599 157 LIYALPGQTIEDVKESLDKALALDIPHYSLYSLILEPKTVFYNLMRKGKLRLPTEDLEAEMYEYLMSEMEKHGFHQYEIS 236 (377)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
T ss_conf 54278889899999999999730636345544233588768888755987899979999999999999997599741203
Q ss_pred CCCCCCHH
Q ss_conf 83001031
Q gi|254780676|r 304 PLTRSSYH 311 (329)
Q Consensus 304 PlVRSSY~ 311 (329)
T Consensus 237 nfak~g~~ 244 (377)
T PRK08599 237 NFAKPGFE 244 (377)
T ss_pred HHCCCCCH
T ss_conf 31378722