HHsearch alignment for GI: 254780676 and conserved domain: PRK09240
>PRK09240 thiH thiamine biosynthesis protein ThiH; Reviewed.
Probab=98.88 E-value=3.8e-08 Score=79.09 Aligned_cols=210 Identities=20% Similarity=0.284 Sum_probs=158.2
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCC---CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 6999866522353522344678998---8882357999999997077518985054453453258999999999985335
Q gi|254780676|r 87 ATFMILGAICTRACTFCNVATGKPQ---PLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAP 163 (329)
Q Consensus 87 ATFMilG~~CTR~C~FC~V~~G~P~---~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P 163 (329)
T Consensus 75 faPLYlSN~C~N~C~YCGf~~~N~i~R~~Ls~eEI~~E~~ai~~~G~k~ILLvtGE--~~~~~~~~Yi~~~v~~ik~~f~ 152 (371)
T PRK09240 75 YTPLYLSNLCANDCTYCGFSMSNKIKRKTLDEEEIEREMAAIKKLGFEHILLVTGE--HEAKVGVDYIRRALPLAREYFS 152 (371)
T ss_pred EECHHHHCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCC--CCCCCCHHHHHHHHHHHHHHCC
T ss_conf 85044022217788758986778763002899999999999997695238854057--8776988999999999997567
Q ss_pred CCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCC-CCCCCCCC---CCCHHHHHHHHHHHHHHCCCEEEECCCEEEEE
Q ss_conf 868998154623446899987410702332013830-00275638---97035899999999997089167014048876
Q gi|254780676|r 164 STTIEVLTPDFLRKPHALEKVVSAKPDVFNHNLETV-ASNYLMVR---PGARYFHSLRLLQRVKELDPLIFTKSGIMLGL 239 (329)
Q Consensus 164 ~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiETV-~rLy~~VR---p~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGL 239 (329)
T Consensus 153 ~v~iev~Pl----~~eeY~~L~~aG~d~~~vyQETY~~~~Y~~lHp~G~K~dy~~RL~a~eRa~~aGi~~v-giGaLlGL 227 (371)
T PRK09240 153 SVAIEVQPL----SEEEYAELVELGLDGVTVYQETYNPATYAKHHLRGPKQDFFYRLETPERAARAGIRKI-GLGALLGL 227 (371)
T ss_pred CEEEEECCC----CHHHHHHHHHCCCCEEEEEEHHCCHHHHHHHCCCCCCCCCHHHCCCHHHHHHCCCCEE-CEEEEECC
T ss_conf 407995259----9899999998599869996032599999985889985452545237888987599703-61102265
Q ss_pred EECHHHHHHHHHHHH----HCCCCEEECC-HHCCCCCCCCCCCCCCCHHHHHH-----------------------HHHH
Q ss_conf 420688999999999----6699399750-22278610078000238469999-----------------------9999
Q gi|254780676|r 240 GETRNEILQLMDDLR----TADVDFLTMG-QYLQPTRKHHKVESFVTPQDFKS-----------------------YETI 291 (329)
Q Consensus 240 GEt~eEi~e~l~DLr----~~gvdilTiG-QYL~Ps~~h~pV~ryv~P~eF~~-----------------------~~~~ 291 (329)
T Consensus 228 ~dwr~e~~~~~~Ha~~L~~~y~~~~~siS~PRlrP~~g~~~p~~~vsD~~l~q~i~a~Rl~~P~~gi~lSTRE~~~~Rd~ 307 (371)
T PRK09240 228 SDWRTDALMTALHLRYLQRKYWRARYSISFPRLRPCTGGFEPKSIVSDRQLVQLICAFRLFLPDVEISLSTRESPEFRDN 307 (371)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHH
T ss_conf 46899999999999999987799875763575336889988986578899999999999866555616864789899988
Q ss_pred HHHCCCCEEECC
Q ss_conf 997496243404
Q gi|254780676|r 292 AYSKGFLMVSAS 303 (329)
Q Consensus 292 a~~~Gf~~V~Sg 303 (329)
T Consensus 308 li~lGvT~mSAg 319 (371)
T PRK09240 308 LIPLGITKMSAG 319 (371)
T ss_pred HHHHCCEEECCC
T ss_conf 885256025555