HHsearch alignment for GI: 254780676 and conserved domain: PRK09249
>PRK09249 coproporphyrinogen III oxidase; Provisional.
Probab=97.58 E-value=0.012 Score=40.37 Aligned_cols=214 Identities=13% Similarity=0.246 Sum_probs=131.5
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHH------HHHHHHHHHHCCCEEEEECCCCCCCCCCH------HHHHHHH
Q ss_conf 69998665223535223446789988882357------99999999707751898505445345325------8999999
Q gi|254780676|r 87 ATFMILGAICTRACTFCNVATGKPQPLDPQEP------ENISWAVRSMKLSHVVITSVDRDDLDDGG------AQHFAEV 154 (329)
Q Consensus 87 ATFMilG~~CTR~C~FC~V~~G~P~~~D~~EP------~rvA~av~~l~Lk~vViTSV~RDDL~DgG------A~hfa~~ 154 (329)
T Consensus 52 lSLYiHiPFC~~~C~YC~~~~~~~~~~~~~~~Yl~~L~~Ei~~~~~~l~~~~~-v~~i~----~GGGTPs~L~~~~l~~l 126 (456)
T PRK09249 52 LSLYVHIPFCRSLCYYCGCNKIITRDHEKADPYLDALEKEIALVAPLLPGGRK-VSQLH----WGGGTPTFLSPEQLTRL 126 (456)
T ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC-EEEEE----ECCCCHHHCCHHHHHHH
T ss_conf 59998517816828999980135788557999999999999998876178983-67999----78967064999999999
Q ss_pred HHHHHHHCC-----CCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCE
Q ss_conf 999985335-----868998154623446899987410702332013830-00275638970358999999999970891
Q gi|254780676|r 155 ISAIRESAP-----STTIEVLTPDFLRKPHALEKVVSAKPDVFNHNLETV-ASNYLMVRPGARYFHSLRLLQRVKELDPL 228 (329)
Q Consensus 155 I~~Ir~~~P-----~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiETV-~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~ 228 (329)
T Consensus 127 ~~~l~~~f~~~~~~EitiE~nP~~~--~~~~l~~l~~~GvnRiSlGVQsfd~~vl~~igR~h~~~~~~~~i~~ar~~Gf~ 204 (456)
T PRK09249 127 MALLREHFNFAPDAEISIEIDPREL--DLEMLDALRELGFNRLSLGVQDFDPEVQKAINRIQPFELTFALVEAARELGFT 204 (456)
T ss_pred HHHHHHHCCCCCCCEEEEEECCCCC--CHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 9999986688988359998434758--79999999845975688605357879999852889999999999999981997
Q ss_pred -EEECCCEEEEE-EECHHHHHHHHHHHHHCCCCEEECCHHCC-CCC-CCC-CCCC--CCCH----HHHHHHHHHHHHCCC
Q ss_conf -67014048876-42068899999999966993997502227-861-007-8000--2384----699999999997496
Q gi|254780676|r 229 -IFTKSGIMLGL-GETRNEILQLMDDLRTADVDFLTMGQYLQ-PTR-KHH-KVES--FVTP----QDFKSYETIAYSKGF 297 (329)
Q Consensus 229 -i~TKSGlMvGL-GEt~eEi~e~l~DLr~~gvdilTiGQYL~-Ps~-~h~-pV~r--yv~P----~eF~~~~~~a~~~Gf 297 (329)
T Consensus 205 ~in--~DLIyGLP~QT~~~~~~tl~~~~~l~Pdhis~y~yah~P~~~~~qr~i~~~~LP~~~~~~~m~~~a~~~L~~aGY 282 (456)
T PRK09249 205 SIN--FDLIYGLPKQTPESFARTLEKVLELRPDRLAVFNYAHVPWLFKAQRKIDEADLPSPEEKLEILQAAIETLTEAGY 282 (456)
T ss_pred CCC--HHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 210--488606998769999999999965599889950223472045565303656797999999999999999997798
Q ss_pred CEEECCCCCCCC
Q ss_conf 243404830010
Q gi|254780676|r 298 LMVSASPLTRSS 309 (329)
Q Consensus 298 ~~V~SgPlVRSS 309 (329)
T Consensus 283 ~~igidhFA~p~ 294 (456)
T PRK09249 283 QYIGMDHFALPD 294 (456)
T ss_pred EEECCCCCCCCC
T ss_conf 585356444788