HHsearch alignment for GI: 254780676 and conserved domain: TIGR01212
>TIGR01212 TIGR01212 radical SAM protein, TIGR01212 family; InterPro: IPR005911 This uncharacterised protein family shows significant similarity to IPR005910 from INTERPRO, a longer protein that is a histone acetyltransferase at its C-terminus and is a subunit of RNA polymerase II (in yeast). This family lacks the GNAT acetyltransferase domain..
Probab=95.99 E-value=0.02 Score=38.66 Aligned_cols=158 Identities=23% Similarity=0.363 Sum_probs=98.7
Q ss_pred CCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH---------HHHHHHHHHCCCEEEE-----E
Q ss_conf 2578878767508972699986652235352234467899888823579---------9999999707751898-----5
Q gi|254780676|r 71 EEAGCPNIGECWNKNHATFMILGAICTRACTFCNVATGKPQPLDPQEPE---------NISWAVRSMKLSHVVI-----T 136 (329)
Q Consensus 71 eeA~CPNi~ECw~~gtATFMilG~~CTR~C~FC~V~~G~P~~~D~~EP~---------rvA~av~~l~Lk~vVi-----T 136 (329)
T Consensus 24 gGF~CPNRD-------------GT~G~GGCtfC~~a~~-~~f~~~~~~~~~~~~~~i~~~~~~~~k~G~kkf~aYFQ~yT 89 (307)
T TIGR01212 24 GGFSCPNRD-------------GTIGRGGCTFCNDASK-PSFADEVTQARIPIKEQIKKRKKKYKKDGIKKFIAYFQAYT 89 (307)
T ss_pred CCCCCCCCC-------------CCCCCCCEEECCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
T ss_conf 578877888-------------7002577252178888-85245102354468999999997653157315789973887
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCC-------CEEEE-----ECCCCCCCHHHHHHHHHCCCHHHH------HCCCC
Q ss_conf 0544534532589999999999853358-------68998-----154623446899987410702332------01383
Q gi|254780676|r 137 SVDRDDLDDGGAQHFAEVISAIRESAPS-------TTIEV-----LTPDFLRKPHALEKVVSAKPDVFN------HNLET 198 (329)
Q Consensus 137 SV~RDDL~DgGA~hfa~~I~~Ir~~~P~-------~~IEv-----LiPDf~G~~~al~~v~~A~pdV~n------HNiET 198 (329)
T Consensus 90 n------------TYAp-ve~Lk~~y~~aL~~~~vVGlsvgTRPDC~P~--~VLDlL~ey~~~GyevWvELGLQtah~~T 154 (307)
T TIGR01212 90 N------------TYAP-VEVLKEMYEQALSEDDVVGLSVGTRPDCVPD--EVLDLLAEYKERGYEVWVELGLQTAHDRT 154 (307)
T ss_pred C------------CCHH-HHHHHHHHHHHHHHCCEEEEEECCCCCCCHH--HHHHHHHHHHHCCEEEEEECCCCCHHHHH
T ss_conf 6------------5002-6888899998763278057753688987747--89999999954975899960535655899
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEE-EECHHHHHHHHHHHHHCCCCEEEC
Q ss_conf 00027563897035899999999997089167014048876-420688999999999669939975
Q gi|254780676|r 199 VASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGL-GETRNEILQLMDDLRTADVDFLTM 263 (329)
Q Consensus 199 V~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGL-GEt~eEi~e~l~DLr~~gvdilTi 263 (329)
T Consensus 155 L----~~INRgHd~~~y~~a~~~~~krGikVC--~H~I~GLPgE~~~~~~eTak~~~~l~vdGiKi 214 (307)
T TIGR01212 155 L----KKINRGHDFACYVDAVKRARKRGIKVC--SHVILGLPGEDREEMLETAKIVASLDVDGIKI 214 (307)
T ss_pred H----HHHCCCCCHHHHHHHHHHHHHCCCEEE--EEEEECCCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 9----985143787899999999976598899--99874289888889999999998379884887