HHsearch alignment of GI: 254780676 and MMDB domain: 1rqb_A_1-308_422-472
>1rqb_A (A:1-308,A:422-472) Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transferase; HET: KCX; 1.90A {Propionibacterium freudenreichiisubsp}
Probab=91.48 E-value=0.45 Score=28.71 Aligned_cols=143 Identities=10% Similarity=0.027 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCC--CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHH
Q ss_conf 3579999999970775189850544534--53258999999999985335868998154623446899987410702332
Q gi|254780676|r 116 QEPENISWAVRSMKLSHVVITSVDRDDL--DDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFN 193 (329)
Q Consensus 116 ~EP~rvA~av~~l~Lk~vViTSV~RDDL--~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~n 193 (329)
++-..++++..++|..++-+.+...-|. ..-+.. -.+-++.++...|++.+..|.-+ ..+.......-++..
T Consensus 47 e~~~~i~~~Ld~~G~~~iEvg~~a~~~~~~~~~~~~-~~e~l~~~~~~~~~t~~~~l~r~-----~~~~~~~~~~~~vv~ 120 (359)
T 1rqb_A 47 EDXVGACADIDAAGYWSVECWGGATYDSCIRFLNED-PWERLRTFRKLXPNSRLQXLLRG-----QNLLGYRHYNDEVVD 120 (359)
T ss_dssp GGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCC-HHHHHHHHHHHCTTSCEEEEECG-----GGTTSSSCCCHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHCCCC-HHHHHHHHHHHCCCCCCHHHHCH-----HHCCCCCCCCHHHHH
T ss_conf 999999999998299989888884768899862788-79999999985899824363221-----220100258778999
Q ss_pred HCCCCC----CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECC
Q ss_conf 013830----00275638970358999999999970891670140488764206889999999996699399750
Q gi|254780676|r 194 HNLETV----ASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMG 264 (329)
Q Consensus 194 HNiETV----~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiG 264 (329)
.-+++. -+.++........+.....++.+|+.|..+..-=+.+-+-.-+.+.+++.++.+.+.|+|+|.|.
T Consensus 121 ~f~~~s~~~~~~~~ri~~~~n~~~~~~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~G~d~I~i~ 195 (359)
T 1rqb_A 121 RFVDKSAENGXDVFRVFDAXNDPRNXAHAXAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDXGADSIALX 195 (359)
T ss_dssp HHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 999999985138873476788999988889999956987999996167878799999999767773697679871