HHsearch alignment of GI: 254780676 and MMDB domain: 2yx0_A_
>2yx0_A (A:) Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=98.93 E-value=1.7e-08 Score=81.12 Aligned_cols=212 Identities=14% Similarity=0.097 Sum_probs=150.8
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCC----CCCC---CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCH----------
Q ss_conf 7269998665223535223446789----9888---8235799999999707751898505445345325----------
Q gi|254780676|r 85 NHATFMILGAICTRACTFCNVATGK----PQPL---DPQEPENISWAVRSMKLSHVVITSVDRDDLDDGG---------- 147 (329)
Q Consensus 85 gtATFMilG~~CTR~C~FC~V~~G~----P~~~---D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgG---------- 147 (329)
+..-++....-|.-+|.||.+..+. .... ++++-..-+..+...+.+..++++....++..+|
T Consensus 70 ~~~~~i~~t~gCn~~C~yC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (342)
T 2yx0_A 70 RCLQMTPVLAWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKGNPKVDKKKFEEAWNPTHAAISL 149 (342)
T ss_dssp GEEEEESCSSCCSBCCTTCCCSSSSCSCSSCCSSCCCHHHHHHHHHHHHHHHHTTCC--CCSCHHHHHHHTSCCEEEECS
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEC
T ss_conf 44887684125277798899988777775554555798999999999999987653267530267777514875799946
Q ss_pred ------HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCC-CCCCCCC---CCCCCHHHHHHH
Q ss_conf ------899999999998533586899815462344689998741070233201383-0002756---389703589999
Q gi|254780676|r 148 ------AQHFAEVISAIRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFNHNLET-VASNYLM---VRPGARYFHSLR 217 (329)
Q Consensus 148 ------A~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiET-V~rLy~~---VRp~a~Y~rSL~ 217 (329)
..++.+.++.+++... .+-+.++.+.-..+....+..++.+.++=-++. .+..+.. ......|++-++
T Consensus 150 ~gep~~~~~~~~~~~~~~~~~~--~~~~~tn~~~~~~~~~~~~~~~~~~~v~isl~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (342)
T 2yx0_A 150 SGEPMLYPYMGDLVEEFHKRGF--TTFIVTNGTIPERLEEMIKEDKLPTQLYVSITAPDIETYNSVNIPMIPDGWERILR 227 (342)
T ss_dssp SSCGGGSTTHHHHHHHHHHTTC--EEEEEECSCCHHHHHHHHHTTCCCSEEEEEECCSSHHHHHHHHCBSSSCHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHCCC--EEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCHHHHHHH
T ss_conf 8775454409999999986397--28995488772589998864257757996278999899998718777778999999
Q ss_pred HHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHHCC-C-CCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 999999708916701404887642068899999999966993997502227-8-61007800023846999999999974
Q gi|254780676|r 218 LLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQYLQ-P-TRKHHKVESFVTPQDFKSYETIAYSK 295 (329)
Q Consensus 218 vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQYL~-P-s~~h~pV~ryv~P~eF~~~~~~a~~~ 295 (329)
.++.+++.+. .+...+++.-||+++|+.++++-+.+.|++.+++-||.. | ++...--..+.+++++.++.+...+.
T Consensus 228 ~i~~l~~~g~--~v~~~~~~~~g~n~~~~~~~~~~~~~lg~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (342)
T 2yx0_A 228 FLELMRDLPT--RTVVRLTLVKGENMHSPEKYAKLILKARPMFVEAKAYMFVGYSRNRLTINNMPSHQDIREFAEALVKH 305 (342)
T ss_dssp HHHHHTTCSS--EEEEEEEECTTTTCCCHHHHHHHHHHHCCSEEEEEECC------CCCCGGGSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCC--CEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCEECCCCCHHCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 9999996699--88999998689887889999999987499889986525568860112401499889999999999987
Q ss_pred CCCEE
Q ss_conf 96243
Q gi|254780676|r 296 GFLMV 300 (329)
Q Consensus 296 Gf~~V 300 (329)
+....
T Consensus 306 ~~~~~ 310 (342)
T 2yx0_A 306 LPGYH 310 (342)
T ss_dssp CTTEE
T ss_pred CCCCE
T ss_conf 26966