HHsearch results for GI: 254780676 and protein with PDBid: 1nvm_A
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling, bifunctional enzyme; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=94.68 E-value=0.31 Score=28.78 Aligned_cols=125 Identities=13% Similarity=0.127 Sum_probs=64.4
Q ss_pred CHHHHHHHHHHHHHHCCCEEEE-ECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC--HHHHHHHHH----
Q ss_conf 8235799999999707751898-505445345325899999999998533586899815462344--689998741----
Q gi|254780676|r 114 DPQEPENISWAVRSMKLSHVVI-TSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRK--PHALEKVVS---- 186 (329)
Q Consensus 114 D~~EP~rvA~av~~l~Lk~vVi-TSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~--~~al~~v~~---- 186 (329)
|........+.++.+|++-++- ....+-| ...+.+.++.+.+..++. +-++|--|. .+.+..++.
T Consensus 118 ~~~~~~~~~~~a~~~g~~v~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~---i~l~DT~G~~~P~~v~~~v~~l~~ 189 (345)
T 1nvm_A 118 EADVSKQHIEYARNLGMDTVGFLMMSHMIP-----AEKLAEQGKLMESYGATC---IYMADSGGAMSMNDIRDRMRAFKA 189 (345)
T ss_dssp CGGGGHHHHHHHHHHTCEEEEEEESTTSSC-----HHHHHHHHHHHHHHTCSE---EEEECTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCC-----HHHHHHHHHHHHHCCCCE---EEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 777688999999982663000220255676-----356778999998439704---662353346687999999999998
Q ss_pred C-CCHH----HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEEC-----HHHHHHHHHHH-HH
Q ss_conf 0-7023----320138300027563897035899999999997089167014048876420-----68899999999-96
Q gi|254780676|r 187 A-KPDV----FNHNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGET-----RNEILQLMDDL-RT 255 (329)
Q Consensus 187 A-~pdV----~nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt-----~eEi~e~l~DL-r~ 255 (329)
. +|++ =.|| -.+-....+|. +-++|.+.. .+=+.||||- -|+++..+..+ .+
T Consensus 190 ~~~~~i~ig~H~Hn-----------d~GlA~AN~la----A~~aGa~~i--d~ti~G~G~~~GN~~tE~lv~~l~~~g~~ 252 (345)
T 1nvm_A 190 VLKPETQVGMHAHH-----------NLSLGVANSIV----AVEEGCDRV--DASLAGMGAGAGNAPLEVFIAVAERLGWN 252 (345)
T ss_dssp HSCTTSEEEEECBC-----------TTSCHHHHHHH----HHHTTCCEE--EEBGGGCSSTTCBCBHHHHHHHHHHHTCB
T ss_pred HCCCCCCCEEEECC-----------CCCCHHHHHHH----HHHHCCCEE--EEECCCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 62775442157458-----------86829999999----999298889--86335589978862099999999955997
Q ss_pred CCCCEEEC
Q ss_conf 69939975
Q gi|254780676|r 256 ADVDFLTM 263 (329)
Q Consensus 256 ~gvdilTi 263 (329)
.|.|+-.|
T Consensus 253 ~~~d~~~l 260 (345)
T 1nvm_A 253 HGTDLYTL 260 (345)
T ss_dssp CCSCHHHH
T ss_pred CCCCHHHH
T ss_conf 89898999