HHsearch results for GI: 254780676 and protein with PDBid: 2qgq_A
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=99.01 E-value=8.1e-08 Score=75.28 Aligned_cols=198 Identities=14% Similarity=0.184 Sum_probs=131.6
Q ss_pred CCEEEEEECCCCCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHH-----HHHHHHHHH
Q ss_conf 72699986652235352234467--89988882357999999997077518985054453453258-----999999999
Q gi|254780676|r 85 NHATFMILGAICTRACTFCNVAT--GKPQPLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGA-----QHFAEVISA 157 (329)
Q Consensus 85 gtATFMilG~~CTR~C~FC~V~~--G~P~~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA-----~hfa~~I~~ 157 (329)
++-.|+--..-|..+|.||++.. |+...-++++-.+=++...+-|-+.+++++.| +-+.|. ..+..-+.+
T Consensus 3 ~~~A~i~isrGC~~~CsFC~ip~~rG~~rsr~~e~Ii~Ei~~l~~~G~kei~l~~~d---~~~~~~~~~~~~~~~~L~~~ 79 (304)
T 2qgq_A 3 RPYAYVKISDGCDRGCTFCSIPSFKGSLRSRSIEDITREVEDLLKEGKKEIILVAQD---TTSYGIDLYRKQALPDLLRR 79 (304)
T ss_dssp CSEEEEESBCCC-------------CCCCBCCHHHHHHHHHHHHHTTCCEEEEECTT---GGGTTHHHHSSCCHHHHHHH
T ss_pred CCEEEEEECCCCCCCCEECEEEEEECCEEEECHHHHHHHHHHHHHCCCEEEEEEEEC---CCCCCCCCCCCHHHHHHHHH
T ss_conf 861998977698998775556201498377199999999999998699099998564---66555424451148999998
Q ss_pred HHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHH---CCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 9853358689981546234468999874107023320---13830-0027563897035899999999997089167014
Q gi|254780676|r 158 IRESAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFNH---NLETV-ASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKS 233 (329)
Q Consensus 158 Ir~~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nH---NiETV-~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKS 233 (329)
+........+....++-....+.+..++...+.++.| -+|+. ++.-+.++.+.+.+.-++.++.+++.+|++...+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~igieSgs~~vLk~m~r~~t~e~~~~~v~~ir~~~p~~~i~t 159 (304)
T 2qgq_A 80 LNSLNGEFWIRVMYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRT 159 (304)
T ss_dssp HHTSSSSCEEEECCCCGGGCCHHHHHHHHHCTTBCCEEECCCBCSCHHHHHHTTCCSCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 72368835899403584367788777676448464677406432787999875047645554458876766489955763
Q ss_pred CEEEEE-EECHHHHHHHHHHHHHCCCCEEECCHHCC-CCCCCCCCCCCCCHHHH
Q ss_conf 048876-42068899999999966993997502227-86100780002384699
Q gi|254780676|r 234 GIMLGL-GETRNEILQLMDDLRTADVDFLTMGQYLQ-PTRKHHKVESFVTPQDF 285 (329)
Q Consensus 234 GlMvGL-GEt~eEi~e~l~DLr~~gvdilTiGQYL~-Ps~~h~pV~ryv~P~eF 285 (329)
.+|+|+ |||+++..++++-+++++.|.+.+..|-. |.-.-.....-++|+.-
T Consensus 160 ~fIvGfPgET~edf~~T~~fl~~~~~d~~~i~~~sp~pGT~a~~~~~~v~~~~k 213 (304)
T 2qgq_A 160 SIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDEEGTVAFNLKEKVDPEMA 213 (304)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECCC-----------CCCHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCCCCCHHHH
T ss_conf 575678987689999999999856978330024256699766663678997999