HHSEARCH alignment of GI: 254780676 and SCOP domain: d1r30a_

Alignment
>d1r30a_ c.1.28.1 (A:) Biotin synthase {Escherichia coli [TaxId: 562]}
Probab=99.78  E-value=6.5e-18  Score=144.89  Aligned_cols=198  Identities=16%  Similarity=0.237  Sum_probs=151.4

Q ss_pred             EEEEEECCCCCCCCCCCCCCCCC------CCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             69998665223535223446789------988882357999999997077518985054453453258999999999985
Q gi|254780676|r   87 ATFMILGAICTRACTFCNVATGK------PQPLDPQEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRE  160 (329)
Q Consensus        87 ATFMilG~~CTR~C~FC~V~~G~------P~~~D~~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~  160 (329)
                      ..|.+..+.|..+|.||+.....      ...+++++....++.....|.+.+++.+-. +...+.....+.+.|+.+++
T Consensus        41 ~~~~~~TngC~~~C~fC~~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~G~~~~~~~~g~-~~~~~~~~~~~~~~i~~~~~  119 (312)
T d1r30a_          41 TLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAW-KNPHERDMPYLEQMVQGVKA  119 (312)
T ss_dssp             EEEEEECSCBSSCCSSCSCBTTSCTTCCCCCCCCHHHHHHHHHHHHHTTCSEEEEEECC-SSCCTTTHHHHHHHHHHHHH
T ss_pred             EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCC-CCCCHHHHHHHHHHHHHCCC
T ss_conf             13475189988869839987668988764212455789999999997499899970577-78740668999999985211


Q ss_pred             HCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEE
Q ss_conf             33586899815462344689998741070233201383000275638970358999999999970891670140488764
Q gi|254780676|r  161 SAPSTTIEVLTPDFLRKPHALEKVVSAKPDVFNHNLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLG  240 (329)
Q Consensus       161 ~~P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLG  240 (329)
                      ..+.+.+.+...    +.+.++.+.+||.+.+++++||.++++..+.+..+|++.+++++.++++|  +.+.+|+|+|+|
T Consensus       120 ~~~~~~~~~~~l----~~e~l~~lk~aG~~~i~~~iEs~~~~~~~~~~~~~~~~~~~~~~~a~~~G--i~~~~~~i~G~~  193 (312)
T d1r30a_         120 MGLEACMTLGTL----SESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAG--IKVCSGGIVGLG  193 (312)
T ss_dssp             TTSEEEEECSSC----CHHHHHHHHHHCCCEEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHH--CEEECCEEECSS
T ss_pred             CCCEEEECCCCC----HHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHC--CCEECCEEECCC
T ss_conf             363232011110----39998886534600674211214555334789999999999999999834--663002575576


Q ss_pred             ECHHHHHHHHHHHHHCCCC--EEECCHHCCCCC-CCCCCCCCCCHHHHHHHHHHH
Q ss_conf             2068899999999966993--997502227861-007800023846999999999
Q gi|254780676|r  241 ETRNEILQLMDDLRTADVD--FLTMGQYLQPTR-KHHKVESFVTPQDFKSYETIA  292 (329)
Q Consensus       241 Et~eEi~e~l~DLr~~gvd--ilTiGQYL~Ps~-~h~pV~ryv~P~eF~~~~~~a  292 (329)
                      ||.+|+++.+..|++.+.+  .+.+.-+ .|-+ ..+.-..-++++++..+-.++
T Consensus       194 et~~d~~~~l~~l~~l~~~~~~i~~~~~-~p~~gT~l~~~~~~~~~e~l~~iA~~  247 (312)
T d1r30a_         194 ETVKDRAGLLLQLANLPTPPESVPINML-VKVKGTPLADNDDVDAFDFIRTIAVA  247 (312)
T ss_dssp             CCHHHHHHHHHHHHSSSSCCSEEEEEEC-CCCTTSTTSSCCCCCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHCCCCCCEEEECCC-CCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             8679999999999855778876430541-68998432445689889999999999


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Radical SAM enzymes
family: Biotin synthase
domain: Biotin synthase
species: Escherichia coli [TaxId: 562]