RPSBLAST alignment for GI: 254780676 and conserved domain: smart00729
>gnl|CDD|128968 smart00729, Elp3, Elongator protein 3, MiaB family, Radical SAM. This superfamily contains MoaA, NifB, PqqE, coproporphyrinogen III oxidase, biotin synthase and MiaB families, and includes a representative in the eukaryotic elongator subunit, Elp-3. Some members of the family are methyltransferases. Length = 216
Score = 65.9 bits (161), Expect = 1e-11
Identities = 39/195 (20%), Positives = 73/195 (37%), Gaps = 20/195 (10%)
Query: 86 HATFMILGAICTRACTFC--NVATGKPQPLDPQEPEN-----ISWAVRSMKLSHVVITSV 138
I+ C R CTFC A GK + + + + + V I
Sbjct: 1 PLALYIITRGCPRRCTFCSFPSARGKLRSRYLEALVREIELLAEKGEKEILVGTVFIGGG 60
Query: 139 DRDDLDDGGAQHFAEVISAIRESAP-----STTIEVLTPDFLRKPHALEKVVSAKPDVFN 193
L + E++ AIRE TIE P L + LE + A + +
Sbjct: 61 TPTLLSP---EQLEELLEAIREILGLADDVEITIET-RPGTLTEEL-LEALKEAGVNRVS 115
Query: 194 HNLETVASNYL-MVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGL-GETRNEILQLMD 251
+++ + L + G L +++++E P I + +++GL GET + + +
Sbjct: 116 LGVQSGSDEVLKAINRGHTVEDVLEAVEKLREAGP-IKVSTDLIVGLPGETEEDFEETLK 174
Query: 252 DLRTADVDFLTMGQY 266
L+ D +++
Sbjct: 175 LLKELGPDRVSIFPL 189