HHsearch results for GI: 254780677 and protein with PDBid: 2d4r_A

>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus HB8} SCOP: d.129.3.6
Probab=99.89  E-value=2.1e-21  Score=155.87  Aligned_cols=142  Identities=15%  Similarity=0.234  Sum_probs=124.2

Q ss_pred             CCCEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCEEEE
Q ss_conf             97248999835987999999875742310187520579997268888419999999623126899988861576620896
Q gi|254780677|r    1 MYHFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQKEHYIA   80 (152)
Q Consensus         1 M~~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~~~~~i~   80 (152)
                      |++++.+++|++|++++|++++|+++||+|+|+|.+++++++.+.+    ..+++.+.+++...++.+++....++..+.
T Consensus         1 M~~i~~~~~I~ap~e~V~~~~~d~~~~~~w~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   76 (147)
T 2d4r_A            1 MPEVRAERYIPAPPERVYRLAKDLEGLKPYLKEVESLEVVAREGAR----TRSRWVAVAMGKKVRWLEEEEWDDENLRNR   76 (147)
T ss_dssp             -CEEEEEEEESSCHHHHHHHHHCHHHHGGGCTTEEEEEEEEEETTE----EEEEEEEEETTEEEEEEEEEEEETTTTEEE
T ss_pred             CCEEEEEEEECCCHHHHHHHHHCHHHHHHHCCCCEEEEEEEEECCC----EEEEEEEEECCEEEEEEEEEEEECCEEEEE
T ss_conf             9769999998999999999997977777537671799999860474----699999997783679999999813202899


Q ss_pred             EECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             31245410211379999987998189999999850887----89999999999999999999999999770
Q gi|254780677|r   81 VKHIKNLFNFLENHWHFEEISESKCKVHFSIKYELKNR----LFDMMLKAIFDPSFLSFAKAFEERAHKIY  147 (152)
Q Consensus        81 ~~~~~g~f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~----~~~~~~~~~~~~~~~~~i~aF~~Ra~~~y  147 (152)
                      +...+|++..+.|.|+|+|.++ +|+|+++++|+++.+    +++.++...++...+++++++++||++..
T Consensus        77 ~~~~~g~~~~~~~~~~~~~~~~-gT~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lk~~~ea~~  146 (147)
T 2d4r_A           77 FFSPEGDFDRYEGTWVFLPEGE-GTRVVLTLTYELTIPIFGGLLRKLVQKLMQENVESLLKGLEERVLAAS  146 (147)
T ss_dssp             EEEEEESCSEEEEEEEEEECSS-SEEEEEEEEEECCCTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEECCCCHHHEEEEEEEEECCC-CEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9843786342378999999899-779999999997686278899999999999999999999999987533