HHsearch results for GI: 254780677 and protein with PDBid: 2r55_A

>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural genomics, structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=98.76  E-value=7.4e-07  Score=62.86  Aligned_cols=145  Identities=12%  Similarity=0.067  Sum_probs=98.9

Q ss_pred             CCEEEEEEECCCHHHHHHHHHHHHH--CHHHCCCCCEEEEEECCCCCCCEEEEEEEE--ECCCEEEEEEEE--EE-ECCC
Q ss_conf             7248999835987999999875742--310187520579997268888419999999--623126899988--86-1576
Q gi|254780677|r    2 YHFTADRIVNHSSQQMLSLVSDIER--YPEFVPLCKKVVIHERDNYGENEVLVASMT--INYACMQREFMT--QV-RINQ   74 (152)
Q Consensus         2 ~~~~~~~~i~~~~e~i~~iV~Dve~--YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~--v~~~~~~~~~~s--~~-~~~~   74 (152)
                      ..+..+.+|++||+++++++.|...  -++|.|.|.+++++++.+.. ...+.....  .........|+.  .. ..+.
T Consensus        67 ~~~k~~~~i~~~~~~v~~~l~d~~~~~r~~Wd~~~~~~~vle~~~~~-~~i~y~~~~~~~~~~vs~RDfv~~~~~~~~~~  145 (231)
T 2r55_A           67 NLYRGEGIVYGTLEEVWDCVKPAVGGLRVKWDENVTGFEIIQSITDT-LCVSRTSTPSAAMKLISPRDFVDLVLVKRYED  145 (231)
T ss_dssp             EEEEEEEEESSCHHHHHHHHCC--CCSHHHHCTTCSEEEEEEECSSS-EEEEEEECCCBTTTTBCCEEEEEEEEEEECTT
T ss_pred             EEEEEEEEEECCHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCC-CEEEEEEECCCCCCCCCCCEEEEEEEEEEECC
T ss_conf             79999999979999999988603256888762015369999981899-28999995465778766518999999999079


Q ss_pred             CCEEEEEECCCC--------C--EEEEEEEEEEEECCC--CCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             620896312454--------1--021137999998799--8189999999850887899999999999999999999999
Q gi|254780677|r   75 KEHYIAVKHIKN--------L--FNFLENHWHFEEISE--SKCKVHFSIKYELKNRLFDMMLKAIFDPSFLSFAKAFEER  142 (152)
Q Consensus        75 ~~~~i~~~~~~g--------~--f~~~~g~W~f~~~~~--~~t~V~~~l~fe~~~~~~~~~~~~~~~~~~~~~i~aF~~R  142 (152)
                      ....+...+...        .  ...+.+.|.|+|+++  +.|+|++.+..+++..+...+++.+.....-.+++.++++
T Consensus       146 ~~~~i~~~s~~~~~~p~~~~~VR~~~~~s~~~i~p~~~~~~~t~vt~~~~~Dp~G~iP~~lvn~~~~~~~~~~~~~Lrk~  225 (231)
T 2r55_A          146 GTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYLPQNVVDSFFPRSMTRFYANLQKA  225 (231)
T ss_dssp             SCEEEEEEECCCTTSCCCTTCEEEEECSEEEEEEECC--CCCEEEEEEECEECCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             94999984145444787788489899712589999899998089999998579976649999999998699999999999


Q ss_pred             HHHHC
Q ss_conf             99770
Q gi|254780677|r  143 AHKIY  147 (152)
Q Consensus       143 a~~~y  147 (152)
                      ++++.
T Consensus       226 ~kk~~  230 (231)
T 2r55_A          226 VKQFH  230 (231)
T ss_dssp             HHGGG
T ss_pred             HHHHC
T ss_conf             99743