HHSEARCH alignment of GI: 254780677 and SCOP domain: d1fm4a_

Alignment
>d1fm4a_ d.129.3.1 (A:) Major tree pollen allergen {European white birch (Betula pendula), Bet v 1-l [TaxId: 3505]}
Probab=98.05  E-value=0.00011  Score=47.47  Aligned_cols=113  Identities=13%  Similarity=0.205  Sum_probs=80.5

Q ss_pred             CEEEEEEECCCHHHHHHH-HHHHHH-CHHHCCCCC-EEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEE-CCCCCEE
Q ss_conf             248999835987999999-875742-310187520-579997268888419999999623126899988861-5766208
Q gi|254780677|r    3 HFTADRIVNHSSQQMLSL-VSDIER-YPEFVPLCK-KVVIHERDNYGENEVLVASMTINYACMQREFMTQVR-INQKEHY   78 (152)
Q Consensus         3 ~~~~~~~i~~~~e~i~~i-V~Dve~-YpeFlP~c~-~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~-~~~~~~~   78 (152)
                      .++.+..++.||+++|.+ +.|... .|+.+|... ++++++-+ .+-+...  .+...-++-......|+. .|..++.
T Consensus         4 ~~e~E~~~~v~a~k~~k~~~~d~~~l~pk~~p~~i~~ie~~eGd-g~~GsIr--~~~~~~~~~~~~~Kerve~iD~~~~~   80 (159)
T d1fm4a_           4 NYETEATSVIPAARMFKAFILDGDKLVPKVAPQAISSVENIEGN-GGPGTIK--KINFPEGFPFKYVKDRVDEVDHTNFK   80 (159)
T ss_dssp             EEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTCCEEEEEECS-SSTTCEE--EEECCTTSSSSEEEEEEEEEETTTTE
T ss_pred             EEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCC-CCCCCEE--EEEECCCCCCEEEEEEEEEECCCCCE
T ss_conf             99877660579899999987074322542168626799997789-9988789--99965899714899999987143258


Q ss_pred             EEEECCCCC-----EEEEEEEEEEEECCCCCEEEEEEEEEEECCH
Q ss_conf             963124541-----0211379999987998189999999850887
Q gi|254780677|r   79 IAVKHIKNL-----FNFLENHWHFEEISESKCKVHFSIKYELKNR  118 (152)
Q Consensus        79 i~~~~~~g~-----f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~  118 (152)
                      +.+..++|.     ++.+...-.|.+.++|+|.+..+++|+.+..
T Consensus        81 ~~y~viEGd~l~~~~~s~~~~~k~~~~~~gg~v~kwt~eYe~~~~  125 (159)
T d1fm4a_          81 YNYSVIEGGPVGDTLEKISNEIKIVATPDGGCVLKISNKYHTKGN  125 (159)
T ss_dssp             EEEEEEEBTTBTTTEEEEEEEEEEEECTTSCEEEEEEEEEEESTT
T ss_pred             EEEEEEECCCCCCCEEEEEEEEEEECCCCCCEEEEEEEEEEECCC
T ss_conf             999999166565546899999998538999569999999998899


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Bet v1-like
family: Pathogenesis-related protein 10 (PR10)-like
domain: Major tree pollen allergen
species: European white birch (Betula pendula), Bet v 1-l [TaxId: 3505]