HHSEARCH alignment of GI: 254780677 and SCOP domain: d1vjha_

Alignment
>d1vjha_ d.129.3.1 (A:) Hypothetical protein At1G24000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=95.31  E-value=0.093  Score=28.73  Aligned_cols=83  Identities=12%  Similarity=0.203  Sum_probs=59.5

Q ss_pred             EEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCEEEEEEC
Q ss_conf             48999835987999999875742310187520579997268888419999999623126899988861576620896312
Q gi|254780677|r    4 FTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQKEHYIAVKH   83 (152)
Q Consensus         4 ~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~~~~~i~~~~   83 (152)
                      .+.+.-|.+|+++.|.+..|....    ||.+.+                         +++.  + ..|..+..+.+..
T Consensus         7 l~~eveik~~a~kf~~~~~~~~~~----~~~~~~-------------------------KerV--e-~vD~en~sity~v   54 (120)
T d1vjha_           7 LSVKFDVKCPADKFFSAFVEDTNR----PFEKNG-------------------------KTEI--E-AVDLVKKTMTIQM   54 (120)
T ss_dssp             EEEEEEESSCHHHHHHHHHHHTTS----CSSTTC-------------------------EEEE--E-EEETTTTEEEEEE
T ss_pred             EEEEEEECCCHHHHHHHHHHCCCC----CCCCCC-------------------------EEEE--E-EECCCCCEEEEEE
T ss_conf             999997058899999986622579----977654-------------------------7999--9-9958788899999


Q ss_pred             CCCC----EEEEEEEEEEEECCCC-CEEEEEEEEEEECCH
Q ss_conf             4541----0211379999987998-189999999850887
Q gi|254780677|r   84 IKNL----FNFLENHWHFEEISES-KCKVHFSIKYELKNR  118 (152)
Q Consensus        84 ~~g~----f~~~~g~W~f~~~~~~-~t~V~~~l~fe~~~~  118 (152)
                      ++|.    ++.+.+...|.|.++| +|.+..+++||-.+.
T Consensus        55 ieGdvl~~yksf~~~i~~~p~~~g~gsi~kwt~eYek~~~   94 (120)
T d1vjha_          55 SGSEIQKYFKTLKGSIAVTPIGVGDGSHVVWTFHFEKVHK   94 (120)
T ss_dssp             ECTTGGGTEEEEEEEEEEEECSSSSCEEEEEEEEEEESST
T ss_pred             EEECCCCCEEEEEEEEEEEECCCCCCEEEEEEEEEEECCC
T ss_conf             9001210313789999999668999649999999996899


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Bet v1-like
family: Pathogenesis-related protein 10 (PR10)-like
domain: Hypothetical protein At1G24000
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]