HHSEARCH alignment of GI: 254780677 and SCOP domain: d1x53a1

Alignment
>d1x53a1 d.129.3.5 (A:8-139) Activator of 90 kda heat shock protein ATPase homolog 1, AHSA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.19  E-value=0.024  Score=32.47  Aligned_cols=97  Identities=10%  Similarity=0.102  Sum_probs=58.3

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCEE-EEE
Q ss_conf             2489998359879999998757423101875205799972688884199999996231268999888615766208-963
Q gi|254780677|r    3 HFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINYACMQREFMTQVRINQKEHY-IAV   81 (152)
Q Consensus         3 ~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~~~~~~~~~-i~~   81 (152)
                      +++.++.+++||++||+.+.|-+....|..  ..+++.-+ ++|. ..+      ..+...-++.   ..+++.++ ..|
T Consensus         5 ~i~~~r~~~ap~e~Vw~a~tdpe~l~~W~~--~~~~~d~~-~Gg~-f~~------~~g~~~G~~~---ev~p~~rlv~tw   71 (132)
T d1x53a1           5 KITLKETFLTSPEELYRVFTTQELVQAFTH--APATLEAD-RGGK-FHM------VDGNVSGEFT---DLVPEKHIVMKW   71 (132)
T ss_dssp             EEEEEEEESSCHHHHHHHTTCHHHHHHHSC--SCCBCCCS-TTCC-CBB------TTTTEECCEE---EEETTTEEEEEE
T ss_pred             EEEEEEEECCCHHHHHHHHCCHHHHHHHHC--CCCCCCCC-CCCE-EEE------EECCEEEEEE---EEECCCEEEEEE
T ss_conf             999999978999999999749999974407--75313455-6977-899------8335069999---990798899997


Q ss_pred             ECCCCCE-EEEEEEEEEEECCCCCEEEEEEEEE
Q ss_conf             1245410-2113799999879981899999998
Q gi|254780677|r   82 KHIKNLF-NFLENHWHFEEISESKCKVHFSIKY  113 (152)
Q Consensus        82 ~~~~g~f-~~~~g~W~f~~~~~~~t~V~~~l~f  113 (152)
                      ...+.+- ....-.|.|++.+ ++|++++...-
T Consensus        72 ~~~~~~~~~~s~vt~~l~~~~-~~T~l~l~~~g  103 (132)
T d1x53a1          72 RFKSWPEGHFATITLTFIDKN-GETELCMEGRG  103 (132)
T ss_dssp             EETTSCTTCCEEEEEECCBCS-SCEEEEEEEEE
T ss_pred             ECCCCCCCCCEEEEEEEEECC-CCEEEEEEEEC
T ss_conf             428888887689999999879-94999999988


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Bet v1-like
family: AHSA1 domain
domain: Activator of 90 kda heat shock protein ATPase homolog 1, AHSA1
species: Human (Homo sapiens) [TaxId: 9606]