HHSEARCH alignment of GI: 254780677 and SCOP domain: d2il5a1

Alignment
>d2il5a1 d.129.3.5 (A:5-168) Hypothetical protein SA2116 {Staphylococcus aureus [TaxId: 1280]}
Probab=98.02  E-value=0.00054  Score=43.03  Aligned_cols=112  Identities=7%  Similarity=-0.065  Sum_probs=64.6

Q ss_pred             CCEEEEEEECCCHHHHHHHHHHHHHCHHHCCCC-CEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEEEE-ECCCCCEEE
Q ss_conf             724899983598799999987574231018752-057999726888841999999962312689998886-157662089
Q gi|254780677|r    2 YHFTADRIVNHSSQQMLSLVSDIERYPEFVPLC-KKVVIHERDNYGENEVLVASMTINYACMQREFMTQV-RINQKEHYI   79 (152)
Q Consensus         2 ~~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c-~~~~v~~r~~~~~~~~~~a~l~v~~~~~~~~~~s~~-~~~~~~~~i   79 (152)
                      ..++-++.|++||++||+.++|-+..++|++.- ..+...+-+. ..+......+... .+....+..++ .++++.+ +
T Consensus         7 ~~i~ier~i~Ap~e~Vw~a~tdpe~l~~W~~p~~~~~~~~~~d~-~~Gg~~~~~~~~~-~g~~~~~~g~v~e~~p~~~-i   83 (164)
T d2il5a1           7 VEVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSARTNKEIEADV-KEGGKYRIVDQQR-NGKVNVIEGIYESLVMDEY-V   83 (164)
T ss_dssp             EEEEEEEEESSCHHHHHHHTTCHHHHTTTSSSCTTTEEEEEECC-STTCEEEEEEECG-GGCEEEEEEEEEEEETTTE-E
T ss_pred             EEEEEEEEECCCHHHHHHHHCCHHHHHCCCCCCCCCCEEEEEEC-CCCCEEEEEEECC-CCCEEEEEEEEEEECCCCE-E
T ss_conf             78999999779999999997297987275258996124788614-6680699988558-7515778999999758988-9


Q ss_pred             EEE--CCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEEC
Q ss_conf             631--2454102113799999879981899999998508
Q gi|254780677|r   80 AVK--HIKNLFNFLENHWHFEEISESKCKVHFSIKYELK  116 (152)
Q Consensus        80 ~~~--~~~g~f~~~~g~W~f~~~~~~~t~V~~~l~fe~~  116 (152)
                      .+.  ..+.+-......+.|.+..+|+|+|++....-..
T Consensus        84 ~~t~~~~~~~~~~~~~~~~~~e~~~ggT~vt~~~~~~~~  122 (164)
T d2il5a1          84 KMTIGMPGLSETQDVIEVEFFERETGGTQMLFYYRSLVE  122 (164)
T ss_dssp             EEEESCC--CCCCEEEEEEEEECSSSSEEEEEEEEEEEC
T ss_pred             EEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEEEECCH
T ss_conf             999852688999659999999828997899999960481


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Bet v1-like
family: AHSA1 domain
domain: Hypothetical protein SA2116
species: Staphylococcus aureus [TaxId: 1280]