HHSEARCH alignment of GI: 254780677 and SCOP domain: d2ns9a1

Alignment
>d2ns9a1 d.129.3.10 (A:10-156) Hypothetical protein APE2225 {Aeropyrum pernix [TaxId: 56636]}
Probab=99.55  E-value=9.2e-14  Score=105.47  Aligned_cols=136  Identities=8%  Similarity=0.079  Sum_probs=89.8

Q ss_pred             CEEEEEEECCCHHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCEEEEEEEEECC---CEEEEEEEEEEECCCCCEEE
Q ss_conf             248999835987999999875742310187520579997268888419999999623---12689998886157662089
Q gi|254780677|r    3 HFTADRIVNHSSQQMLSLVSDIERYPEFVPLCKKVVIHERDNYGENEVLVASMTINY---ACMQREFMTQVRINQKEHYI   79 (152)
Q Consensus         3 ~~~~~~~i~~~~e~i~~iV~Dve~YpeFlP~c~~~~v~~r~~~~~~~~~~a~l~v~~---~~~~~~~~s~~~~~~~~~~i   79 (152)
                      +++++..|++||++||++++|+++||+|+|+|.++++.....   ..  ......+.   ........+...........
T Consensus         4 k~e~si~I~ap~e~Vw~~l~D~~~~~~w~p~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (147)
T d2ns9a1           4 RYEGSFEVSKTPEEVFEFLTDPKRFSRAFPGFKSVEVEDGSF---TI--ELRLSLGPLRGDARVRASFEDLEKPSKATVK   78 (147)
T ss_dssp             EEEEEEEESSCHHHHHHHHTCHHHHGGGSTTEEEEEEETTEE---EE--EEEEESSSSEEEEEEEEEEEEEETTTEEEEE
T ss_pred             EEEEEEEECCCHHHHHHHHHCHHHHHHCCCCHHHEEECCCCC---CE--EEEEEEEEEEEEEEEEEEEEEECCCCCEEEE
T ss_conf             998899976999999998749766433565102103036665---40--5799999986676314434540588622578


Q ss_pred             EEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             63124541021137999998799818999999985088789---999999999999999999999999
Q gi|254780677|r   80 AVKHIKNLFNFLENHWHFEEISESKCKVHFSIKYELKNRLF---DMMLKAIFDPSFLSFAKAFEERAH  144 (152)
Q Consensus        80 ~~~~~~g~f~~~~g~W~f~~~~~~~t~V~~~l~fe~~~~~~---~~~~~~~~~~~~~~~i~aF~~Ra~  144 (152)
                      ......+......+.|++++.+ ++|+|++..++++..++-   +.++...+++.++.+++++++|+.
T Consensus        79 ~~~~~~~~~~~~~~~~~l~~~~-~gt~v~~~~~~~~~g~~~~l~~~~v~~~~~~~~~~~l~~lk~~~~  145 (147)
T d2ns9a1          79 GSGRGAGSTLDFTLRFAVEPSG-GGSRVSWVFEGNVGGLAASMGGRVLDSLARRMINDVISGVKRELG  145 (147)
T ss_dssp             EEEECSSEEEEEEEEEEEEEET-TEEEEEEEEEEEEEEGGGGSCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEECCCCCEEEEEEEEEEECC-CCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8640366200048999987449-986999999999685578878999999999999999999999874


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Bet v1-like
family: CoxG-like
domain: Hypothetical protein APE2225
species: Aeropyrum pernix [TaxId: 56636]