BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780679|ref|YP_003065092.1| hypothetical protein CLIBASIA_02830 [Candidatus Liberibacter asiaticus str. psy62] (129 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780679|ref|YP_003065092.1| hypothetical protein CLIBASIA_02830 [Candidatus Liberibacter asiaticus str. psy62] gi|254040356|gb|ACT57152.1| hypothetical protein CLIBASIA_02830 [Candidatus Liberibacter asiaticus str. psy62] Length = 129 Score = 263 bits (671), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 129/129 (100%), Positives = 129/129 (100%) Query: 1 MSYLNWFDLLTIMLLCIIFTCTFKSILHLICSLKYFPRNIYKIFSNIYQQKHNTASFHRA 60 MSYLNWFDLLTIMLLCIIFTCTFKSILHLICSLKYFPRNIYKIFSNIYQQKHNTASFHRA Sbjct: 1 MSYLNWFDLLTIMLLCIIFTCTFKSILHLICSLKYFPRNIYKIFSNIYQQKHNTASFHRA 60 Query: 61 SLQKKDIGATPTKKGNSSQLISTNTNKDKKPRINLREKKQPQRKPITKQKKNPIPLASRS 120 SLQKKDIGATPTKKGNSSQLISTNTNKDKKPRINLREKKQPQRKPITKQKKNPIPLASRS Sbjct: 61 SLQKKDIGATPTKKGNSSQLISTNTNKDKKPRINLREKKQPQRKPITKQKKNPIPLASRS 120 Query: 121 NPMQNNNDR 129 NPMQNNNDR Sbjct: 121 NPMQNNNDR 129 >gi|315122210|ref|YP_004062699.1| hypothetical protein CKC_02300 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495612|gb|ADR52211.1| hypothetical protein CKC_02300 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 99 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 42/104 (40%), Positives = 56/104 (53%), Gaps = 11/104 (10%) Query: 1 MSYLNWFDLLTIMLLCIIFTCTFKSILHLICSLKYFPRNIY----KIFSNIYQQKHNTAS 56 M +N FD+LTI++LCII T F H SL P N Y K FS IY+ + N + Sbjct: 1 MLNVNVFDILTIVVLCIILTLNF----HYFWSLIRNPINSYKRIRKAFSEIYKSQRNISP 56 Query: 57 FHRASLQKKDIGATPTKKGNSSQLISTNTNKDKKPRINLREKKQ 100 L KKD+ PT+K +S+ +T NK K P INL +K+ Sbjct: 57 NSSTPL-KKDLEIKPTRKKQTSK-DTTEENKKKHP-INLAMRKE 97 >gi|313214180|emb|CBY42676.1| unnamed protein product [Oikopleura dioica] Length = 649 Score = 34.7 bits (78), Expect = 4.3, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 43/80 (53%) Query: 49 QQKHNTASFHRASLQKKDIGATPTKKGNSSQLISTNTNKDKKPRINLREKKQPQRKPITK 108 ++++N + ++ + ++ A + G ++ S+ T D +P+IN+++KKQ + Sbjct: 28 EEENNVSDCSEEAISEDEVPAEESSIGGAAPQPSSGTAVDARPQINVQKKKQGWESSGDE 87 Query: 109 QKKNPIPLASRSNPMQNNND 128 +++ P++ +N N N+ Sbjct: 88 DEEDDAPVSEMANLKTNGNE 107 >gi|291088398|dbj|BAI82451.1| immidiate early protain [Human herpesvirus 2] Length = 414 Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 5/54 (9%) Query: 80 LISTNTNKDKKPRINLREKKQPQRK-----PITKQKKNPIPLASRSNPMQNNND 128 L+ T K K+PRINLR P R+ P + PI A P Q++ D Sbjct: 111 LVDTPPRKSKRPRINLRLTSSPDRRAGVVFPEVWRNDRPIRAAQPQAPAQSSGD 164 Searching..................................................done Results from round 2 CONVERGED! >gi|254780679|ref|YP_003065092.1| hypothetical protein CLIBASIA_02830 [Candidatus Liberibacter asiaticus str. psy62] gi|254040356|gb|ACT57152.1| hypothetical protein CLIBASIA_02830 [Candidatus Liberibacter asiaticus str. psy62] Length = 129 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 129/129 (100%), Positives = 129/129 (100%) Query: 1 MSYLNWFDLLTIMLLCIIFTCTFKSILHLICSLKYFPRNIYKIFSNIYQQKHNTASFHRA 60 MSYLNWFDLLTIMLLCIIFTCTFKSILHLICSLKYFPRNIYKIFSNIYQQKHNTASFHRA Sbjct: 1 MSYLNWFDLLTIMLLCIIFTCTFKSILHLICSLKYFPRNIYKIFSNIYQQKHNTASFHRA 60 Query: 61 SLQKKDIGATPTKKGNSSQLISTNTNKDKKPRINLREKKQPQRKPITKQKKNPIPLASRS 120 SLQKKDIGATPTKKGNSSQLISTNTNKDKKPRINLREKKQPQRKPITKQKKNPIPLASRS Sbjct: 61 SLQKKDIGATPTKKGNSSQLISTNTNKDKKPRINLREKKQPQRKPITKQKKNPIPLASRS 120 Query: 121 NPMQNNNDR 129 NPMQNNNDR Sbjct: 121 NPMQNNNDR 129 >gi|315122210|ref|YP_004062699.1| hypothetical protein CKC_02300 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495612|gb|ADR52211.1| hypothetical protein CKC_02300 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 99 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 42/104 (40%), Positives = 56/104 (53%), Gaps = 11/104 (10%) Query: 1 MSYLNWFDLLTIMLLCIIFTCTFKSILHLICSLKYFPRNIYK----IFSNIYQQKHNTAS 56 M +N FD+LTI++LCII T F H SL P N YK FS IY+ + N + Sbjct: 1 MLNVNVFDILTIVVLCIILTLNF----HYFWSLIRNPINSYKRIRKAFSEIYKSQRNISP 56 Query: 57 FHRASLQKKDIGATPTKKGNSSQLISTNTNKDKKPRINLREKKQ 100 L KKD+ PT+K +S+ +T NK K P INL +K+ Sbjct: 57 NSSTPL-KKDLEIKPTRKKQTSK-DTTEENKKKHP-INLAMRKE 97 >gi|332971134|gb|EGK10099.1| hypothetical protein HMPREF0476_0778 [Kingella kingae ATCC 23330] Length = 707 Score = 37.0 bits (84), Expect = 0.78, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%) Query: 42 KIFSNIYQQKHNTASFHRASLQKKDIGATPTKKGNSSQLISTNTNKDKKPRINLREKKQP 101 K SN Q A S +K A ++K N+S + N +KP IN E+ +P Sbjct: 29 KPASNSKTQTRPAAKNQNNSNTRKPAQAASSRKNNASSNNKSTANNARKPTINKPERSKP 88 Query: 102 -QRKPITKQKKNPIPLASR 119 KP T + P++++ Sbjct: 89 ASSKPTTNKPAASKPVSTK 107 >gi|157427928|ref|NP_001098871.1| SH2 domain-containing protein 2A [Bos taurus] gi|157279250|gb|AAI53240.1| SH2D2A protein [Bos taurus] gi|296489684|gb|DAA31797.1| SH2 domain-containing protein 2A [Bos taurus] Length = 418 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 34/81 (41%) Query: 48 YQQKHNTASFHRASLQKKDIGATPTKKGNSSQLISTNTNKDKKPRINLREKKQPQRKPIT 107 + K + F + + KK+ PT++ S + ++ + KP I + + QP+ Sbjct: 226 FGSKSQDSPFQYSPILKKERSIAPTQRDGSGEPKQSSQSPRPKPPIPAKPQLQPEVYTSP 285 Query: 108 KQKKNPIPLASRSNPMQNNND 128 + P SNP+ N D Sbjct: 286 APRPRPALPPKPSNPIYNEPD 306 >gi|110665592|gb|ABG81442.1| SH2 domain protein 2A [Bos taurus] Length = 406 Score = 36.2 bits (82), Expect = 1.3, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 34/81 (41%) Query: 48 YQQKHNTASFHRASLQKKDIGATPTKKGNSSQLISTNTNKDKKPRINLREKKQPQRKPIT 107 + K + F + + KK+ PT++ S + ++ + KP I + + QP+ Sbjct: 214 FGSKSQDSPFQYSPILKKERSIAPTQRDGSGEPKQSSQSPRPKPPIPAKPQLQPEVYTSP 273 Query: 108 KQKKNPIPLASRSNPMQNNND 128 + P SNP+ N D Sbjct: 274 APRPRPALPPKPSNPIYNEPD 294 >gi|225734511|gb|ACO25279.1| serine/threonine protein kinase [Epizootic haematopoietic necrosis virus] Length = 907 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 32/76 (42%) Query: 45 SNIYQQKHNTASFHRASLQKKDIGATPTKKGNSSQLISTNTNKDKKPRINLREKKQPQRK 104 S+ ++ + ++ +K +P +K + + + + K P +K P R Sbjct: 191 SSPFRSHMRKSPARKSPARKSPARKSPARKSPARKSPARKSPARKSPARKSPARKSPARS 250 Query: 105 PITKQKKNPIPLASRS 120 P+ ++P+ +RS Sbjct: 251 PVRSPVRSPVRSPARS 266 >gi|145521823|ref|XP_001446761.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124414250|emb|CAK79364.1| unnamed protein product [Paramecium tetraurelia] Length = 448 Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 6/84 (7%) Query: 49 QQKHNTASFHRASLQKKDIGATPTKKGNSSQLISTNTNKDKKPRINLREKKQPQ---RKP 105 +++ N S K I P K+ +++++ + K R + Q RK Sbjct: 349 KKQPNVVSNQHIPRPK--IPLAPVKQQQAAKILKEPQSHRPKERPVSAMRAQSPCSVRKS 406 Query: 106 I-TKQKKNPIPLASRSNPMQNNND 128 + KQ +NP PL +SNP NND Sbjct: 407 VDQKQNRNPSPLVRKSNPYIKNND 430 >gi|195435640|ref|XP_002065788.1| GK19479 [Drosophila willistoni] gi|194161873|gb|EDW76774.1| GK19479 [Drosophila willistoni] Length = 962 Score = 35.5 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 16/95 (16%) Query: 50 QKHNTASFHRASLQKKDIGATPTKKGNSSQLISTNTNKDKKPRIN--------LREKKQP 101 Q+H + +Q + + +Q+ +N +KP N KK+P Sbjct: 9 QQHEASPTEGTPMQLPLPLPSNVEDHVKTQVNVSNEGNKRKPNANNQRKQLKTTETKKKP 68 Query: 102 QRKPITKQKKNP--------IPLASRSNPMQNNND 128 +RKPI + K P IP + P QN N+ Sbjct: 69 ERKPIRRGKAKPQENGKTNVIPKSPSGMPTQNANE 103 >gi|70917796|ref|XP_732977.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56504346|emb|CAH82413.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 139 Score = 35.5 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 1 MSYLNWFDLLTIMLLCIIFTCTFKSILHLI--CSLKYFPRNIYKIFSNIY 48 + + + +L I + ++ TC +I+H++ +L Y I++IF N + Sbjct: 13 LPNVTKYMILIIFFVTLLITCNLLNIVHILLDWNLIYNKYQIWRIFFNFF 62 >gi|72152033|ref|XP_788454.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115747675|ref|XP_001190669.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 668 Score = 35.5 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Query: 51 KHNTASFHRASLQKKDIGATPTKKGNSSQLISTNTNKDKKPRINLREKKQPQRKPITKQK 110 + F + K+D P K+G + K K+P+ L E K+ +RK + KQ Sbjct: 88 QKGGKPFPKQGHFKQDKQTKPWKEGQKGKEGGDEAEKTKRPK--LEELKKKERKQVRKQM 145 Query: 111 KNPIPLASRS 120 + LA ++ Sbjct: 146 NSNFELAQKA 155 >gi|115744100|ref|XP_001197420.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115972899|ref|XP_001187726.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 668 Score = 35.5 bits (80), Expect = 2.5, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Query: 51 KHNTASFHRASLQKKDIGATPTKKGNSSQLISTNTNKDKKPRINLREKKQPQRKPITKQK 110 + F + K+D P K+G + K K+P+ L E K+ +RK + KQ Sbjct: 88 QKGGKPFPKQGHFKQDKQTKPWKEGQKGKEGGDEAEKTKRPK--LEELKKKERKQVRKQM 145 Query: 111 KNPIPLASRS 120 + LA ++ Sbjct: 146 NSNFELAQKA 155 >gi|83317335|ref|XP_731117.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23491050|gb|EAA22682.1| unknown protein [Plasmodium yoelii yoelii] Length = 261 Score = 35.5 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 1 MSYLNWFDLLTIMLLCIIFTCTFKSILHLI--CSLKYFPRNIYKIFSNIY 48 + + + ++ I L+ ++ TC +++H++ +L Y I++IF N + Sbjct: 13 LPNVTKYMIIIIFLVTLLITCNLLNVVHILLDWNLIYNKYQIWRIFFNFF 62 >gi|68073215|ref|XP_678522.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56499017|emb|CAH99029.1| conserved hypothetical protein [Plasmodium berghei] Length = 261 Score = 35.5 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 28/50 (56%), Gaps = 2/50 (4%) Query: 1 MSYLNWFDLLTIMLLCIIFTCTFKSILHLI--CSLKYFPRNIYKIFSNIY 48 + + + ++ I L+ ++ TC +++H++ +L Y I++IF N + Sbjct: 13 LPNVTKYMIIIIFLVTLLITCNLLNVVHILLDWNLIYNKYQIWRIFFNFF 62 >gi|169825276|ref|YP_001692887.1| hypothetical protein FMG_1579 [Finegoldia magna ATCC 29328] gi|167832081|dbj|BAG08997.1| conserved hypothetical protein [Finegoldia magna ATCC 29328] Length = 1941 Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Query: 49 QQKHNTASFHRASLQKKDIGATPTKKGNSSQLISTNTNKDKKPRINLREKKQPQRKPITK 108 +++ + +KK++ +K N + N +K+P N +KK + +P + Sbjct: 1828 KKQEKENPEKKNP-EKKNLEKKNPEKKNLEKENPKKENSEKQPDKNTIDKKSEKSQPKNE 1886 Query: 109 QKKNPIPLASRSNPMQ 124 + P + +SN ++ Sbjct: 1887 KTTTKTPNSDQSNRVE 1902 >gi|313221012|emb|CBY31844.1| unnamed protein product [Oikopleura dioica] Length = 222 Score = 33.9 bits (76), Expect = 7.3, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 44/86 (51%) Query: 43 IFSNIYQQKHNTASFHRASLQKKDIGATPTKKGNSSQLISTNTNKDKKPRINLREKKQPQ 102 S ++++N + ++ + ++ A + G ++ S+ T D +P+IN+++KKQ Sbjct: 22 AASEKKEEENNVSDCSEDAISEDEVQAEESSIGGAAPQPSSGTAVDARPQINVQKKKQGW 81 Query: 103 RKPITKQKKNPIPLASRSNPMQNNND 128 + +++ P++ +N N N+ Sbjct: 82 ESSGDEDEEDDAPVSEMANLKTNGNE 107 >gi|327354107|gb|EGE82964.1| cell wall proline rich protein [Ajellomyces dermatitidis ATCC 18188] Length = 885 Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 16/96 (16%) Query: 33 LKYFPRNIYKIFSNIYQQKHNTASFHRASLQKKDIGATPTKKGNSSQLISTNTNKDKKPR 92 LK Y F+NI K +AS + PT S KKP+ Sbjct: 323 LKKNIIEGYNKFTNISMSKKGSASLPK---------LEPTASSQDRPRTSPERKPSKKPK 373 Query: 93 -------INLREKKQPQRKPITKQKKNPIPLASRSN 121 I R+ K+ +KP++++ P P+ SR+N Sbjct: 374 KVRSWAGILTRKAKKRSKKPLSRKAPTPPPILSRTN 409 >gi|261189255|ref|XP_002621039.1| cell wall proline rich protein [Ajellomyces dermatitidis SLH14081] gi|239591824|gb|EEQ74405.1| cell wall proline rich protein [Ajellomyces dermatitidis SLH14081] Length = 884 Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 16/96 (16%) Query: 33 LKYFPRNIYKIFSNIYQQKHNTASFHRASLQKKDIGATPTKKGNSSQLISTNTNKDKKPR 92 LK Y F+NI K +AS + PT S KKP+ Sbjct: 322 LKKNIIEGYNKFTNISMSKKGSASLPK---------LEPTASSQDRPRTSPERKPSKKPK 372 Query: 93 -------INLREKKQPQRKPITKQKKNPIPLASRSN 121 I R+ K+ +KP++++ P P+ SR+N Sbjct: 373 KVRSWAGILTRKAKKRSKKPLSRKAPTPPPILSRTN 408 >gi|124185|sp|P14379|IE68_HHV2 RecName: Full=Immediate-early protein IE4; AltName: Full=IE68 gi|555152|gb|AAA45848.1| immediate early protein 4 [Human herpesvirus 2] Length = 197 Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 80 LISTNTNKDKKPRINLREKKQPQRK-----PITKQKKNPIPLASRSNPMQNNNDR 129 L+ T K K+PRINLR P R+ P + PI A P Q++ DR Sbjct: 111 LVDTPPRKSKRPRINLRLTSSPDRRAGVVFPEVWRSDRPIRAAQPQAPAQSSGDR 165 >gi|331247078|ref|XP_003336169.1| hypothetical protein PGTG_17487 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309315159|gb|EFP91750.1| hypothetical protein PGTG_17487 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1349 Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 6/91 (6%) Query: 27 LHLICSLKYFPRNIYKIFSNIYQQKHNTASFHRASLQKKDIGATPTKKGNSSQLISTNTN 86 +HLI +K P + FS + T +Q D P+ + +T N Sbjct: 146 IHLIDQIKNTPTTFFNPFSA-ESPQSQTQPTSSEPIQNND-NHHPSILASPHPHRTTTEN 203 Query: 87 KDKKPRINLREKKQ----PQRKPITKQKKNP 113 K+K+P+ N+ + PQ I+ + NP Sbjct: 204 KEKQPKSNVGLRINSSFPPQELAISTGQANP 234 >gi|291088398|dbj|BAI82451.1| immidiate early protain [Human herpesvirus 2] Length = 414 Score = 33.5 bits (75), Expect = 9.6, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 5/54 (9%) Query: 80 LISTNTNKDKKPRINLREKKQPQRK-----PITKQKKNPIPLASRSNPMQNNND 128 L+ T K K+PRINLR P R+ P + PI A P Q++ D Sbjct: 111 LVDTPPRKSKRPRINLRLTSSPDRRAGVVFPEVWRNDRPIRAAQPQAPAQSSGD 164 >gi|239614743|gb|EEQ91730.1| cell wall proline rich protein [Ajellomyces dermatitidis ER-3] Length = 884 Score = 33.5 bits (75), Expect = 9.8, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 16/96 (16%) Query: 33 LKYFPRNIYKIFSNIYQQKHNTASFHRASLQKKDIGATPTKKGNSSQLISTNTNKDKKPR 92 LK Y F+NI + + ASL K PT S KKP+ Sbjct: 322 LKKNIIEGYNKFTNI-----SISKKGSASLPK----LEPTASSQDRPRTSPERKPSKKPK 372 Query: 93 -------INLREKKQPQRKPITKQKKNPIPLASRSN 121 I R+ K+ +KP++++ P P+ SR+N Sbjct: 373 KVRSWAGILTRKAKKRSKKPLSRKAPTPPPILSRTN 408 >gi|146180786|ref|XP_001021487.2| IBR domain containing protein [Tetrahymena thermophila] gi|146144354|gb|EAS01242.2| IBR domain containing protein [Tetrahymena thermophila SB210] Length = 763 Score = 33.5 bits (75), Expect = 9.9, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%) Query: 41 YKIFSNIYQQKH----NTASFHRAS--LQKKDIGATPTKKGNSSQLISTNTNKDKKPRIN 94 Y FS+ Q+ N F ++ L K+ G P N+S+ T +N+ K N Sbjct: 628 YPAFSHFSPQRSAVNINIPRFSQSPQKLTIKNFGQKPVPIENNSENKETESNQKKNQSPN 687 Query: 95 LREKKQPQRKP 105 + +KK+ +R+P Sbjct: 688 IIQKKRERRRP 698 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.316 0.129 0.360 Lambda K H 0.267 0.0390 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,191,109,326 Number of Sequences: 14124377 Number of extensions: 76805986 Number of successful extensions: 378886 Number of sequences better than 10.0: 235 Number of HSP's better than 10.0 without gapping: 99 Number of HSP's successfully gapped in prelim test: 255 Number of HSP's that attempted gapping in prelim test: 378404 Number of HSP's gapped (non-prelim): 637 length of query: 129 length of database: 4,842,793,630 effective HSP length: 95 effective length of query: 34 effective length of database: 3,500,977,815 effective search space: 119033245710 effective search space used: 119033245710 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 75 (33.6 bits)