HHsearch alignment for GI: 254780680 and conserved domain: PRK02983

>PRK02983 lysS lysyl-tRNA synthetase; Provisional.
Probab=95.11  E-value=0.018  Score=39.16  Aligned_cols=117  Identities=19%  Similarity=0.255  Sum_probs=67.5

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHCCCHHHHCC
Q ss_conf             99999999999862232032021235620278898655142247677643100023134541145445342059555042
Q gi|254780680|r  173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPL  252 (430)
Q Consensus       173 ~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~~~d~l~Li~TaEvpL~~~~~~~~l~~~~LPi  252 (430)
T Consensus       777 ~~RS~Vi~aiR~~-L~~~GFlEVETPiLq~--~~GGA~ARP-FlThsna~d~~~YL-riAP----ELflKRLmVGG-f-e  845 (1099)
T PRK02983        777 RARSAVLRAVRET-LVAKGFLEVETPILQQ--IHGGANARP-FLTHINAYDLDLYL-RIAP----ELYLKRLCVGG-V-E  845 (1099)
T ss_pred             HHHHHHHHHHHHH-HHHCCCEEEECCCCCC--CCCCCCCCC-CCCCCCCCCCCCEE-ECCH----HHHHHHHHHCC-C-C
T ss_conf             9999999999999-9878988955754677--888756785-30103367866145-1480----89999998648-6-3


Q ss_pred             EEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             0885322107884335543432122221020021212786501457898999999999984
Q gi|254780680|r  253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL  313 (430)
Q Consensus       253 k~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~S~~~~e~~~~~~~~i~~~L  313 (430)
T Consensus       846 RVFEI~RcFRNEg----lrad---HnPEFTmLE~Y------~Ay~Dyedmm~ltEeLi~~~  893 (1099)
T PRK02983        846 RVFELGRAFRNEG----VDFS---HNPEFTLLEAY------QAHADYLVMRDLCRELIQNA  893 (1099)
T ss_pred             CCEEECCCCCCCC----CCCC---CCCCHHHHHHH------HHHCCHHHHHHHHHHHHHHH
T ss_conf             1134325446799----9987---49407999999------98478999999999999999