HHsearch alignment for GI: 254780680 and conserved domain: PRK05431
>PRK05431 seryl-tRNA synthetase; Provisional.
Probab=100.00 E-value=0 Score=1283.05 Aligned_cols=421 Identities=55% Similarity=0.894 Sum_probs=412.5
Q ss_pred CCCHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 98844785199999999984698958899999999999999999999999999999999986449987999999999999
Q gi|254780680|r 1 MLDIQWIRQNPEHLDIALKKRHLEPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTL 80 (430)
Q Consensus 1 MLDik~IRen~e~v~~~l~~R~~~~~id~il~Ld~~rr~l~~e~e~LraerN~lSKeIg~~k~~~~~~~~~~Lk~e~~~L 80 (430)
T Consensus 1 MLDik~IReNpe~v~~~lkkR~~~~~id~il~lD~~rr~l~~e~e~Lr~erN~iSK~Ig~~kk~g~--~~~~l~~~~~~l 78 (422)
T PRK05431 1 MLDIKLIRENPDAVKEKLAKRGDPLDVDELLELDEERRELQTETEELQAERNALSKEIGQAKAKGE--DAEELIAEVKEL 78 (422)
T ss_pred CCCHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHH
T ss_conf 988789874999999999865984519999999999999999999999999999999999874897--799999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHC
Q ss_conf 98864446666677888774431002258811221135554024200015656656662112202211731000112221
Q gi|254780680|r 81 KEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLS 160 (430)
Q Consensus 81 k~eik~le~~~~~le~el~~lll~IPNi~~~~VP~G~de~dNv~i~~~G~~~~f~f~~k~H~elge~l~liDfe~a~kvs 160 (430)
T Consensus 79 k~~i~~le~~~~~~~~~l~~~ll~IPNi~~~~VP~G~dE~dNv~I~~~G~~~~f~f~~k~H~elge~l~liDfe~aaKiS 158 (422)
T PRK05431 79 KEEIKALEAELKELEAELEELLLSIPNLPHDSVPVGKDEDDNVEVRRWGEPREFDFEPKDHWELGEKLGILDFERAAKVS 158 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHC
T ss_conf 99999999999999999999998489988865788998302255420377444567887788998764761046677550
Q ss_pred CCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHHHH-HCCEECCCCCCHHHHH
Q ss_conf 675301056488999999999998622320320212356202788986551422476776431-0002313454114544
Q gi|254780680|r 161 GARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-DGRWLIPTSEVSLTNL 239 (430)
Q Consensus 161 GsrF~~Lkg~~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~~~-d~l~Li~TaEvpL~~~ 239 (430)
T Consensus 159 GsRF~~Lkg~~A~LerALi~f~ld~~~-~~Gy~~v~~P~lv~~~~~~gtGqlPkfe~~~Y~i~~~dl~Li~TAEvpL~~~ 237 (422)
T PRK05431 159 GSRFYVLKGDGARLERALIQFMLDLHT-EEGYTEVIPPYLVNEESMYGTGQLPKFEEDLFKIEDDDLYLIPTAEVPLTNL 237 (422)
T ss_pred CCCEEEEHHHHHHHHHHHHHHHHHHHH-HCCCEEEECHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEECCCCCCHHHH
T ss_conf 787046004899999999999999999-8799799673763678874453797448775410588717605653212334
Q ss_pred HHHHCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 53420595550420885322107884335543432122221020021212786501457898999999999984106753
Q gi|254780680|r 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRV 319 (430)
Q Consensus 240 ~~~~~l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~S~~~~e~~~~~~~~i~~~L~lpyRv 319 (430)
T Consensus 238 ~~~eil~~~~LPik~~~~S~CFR~EAGs~GkdtrGl~RvHQF~KVE~f~~~~pe~S~~~~e~~~~~~e~i~~~L~lpyrv 317 (422)
T PRK05431 238 HRDEILDEEELPIKYTAYSPCFRSEAGSAGRDTRGLIRQHQFDKVELVKFTKPEDSYAELEELTGNAEEILQKLELPYRV 317 (422)
T ss_pred HHCCCCCHHHCCHHHEEECCHHHHCCCCCCCCCCCCEEEEEECEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 40113365439844527883653031336755676124430000343353586779999999999999999875985023
Q ss_pred CCCCCHHCCCHHHEEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 03780117844340241011010048332375310210076453268473389984101042004322899999999883
Q gi|254780680|r 320 VSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILEN 399 (430)
Q Consensus 320 v~~~sgdlg~~a~~~~DiE~w~P~~~~y~Ev~S~Snc~D~QsrRl~iry~~~~~~~~~~~htlNgt~~A~~R~l~ailEn 399 (430)
T Consensus 318 v~~~sgdlg~~a~~~yDiE~W~P~~~~y~EvsS~Snc~d~QsrRl~iry~~~~~~-~~~~htlNgt~~A~~R~l~ailEn 396 (422)
T PRK05431 318 VLLCTGDMGFSAAKTYDLEVWLPGQNTYREISSCSNCTDFQARRANIRYRDEDGK-PELVHTLNGSGLAVGRTLVAILEN 396 (422)
T ss_pred CCCCCCCCCHHHHHHEEEEEEECCCCCEEEEEEECCCCHHHHHHCCCEEECCCCC-EEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 5678765576656545457871566854524000150148875302655179998-664043115121887899999884
Q ss_pred CCCCCCCEECCCCCCCCCCCEEEECC
Q ss_conf 46899838658222310188013073
Q gi|254780680|r 400 YLNADGSVTIPTVLRPYMNNLAVIKK 425 (430)
Q Consensus 400 ~q~~dg~i~iP~~L~pym~g~~~i~~ 425 (430)
T Consensus 397 ~q~~dg~i~iP~~L~~y~~~~~~i~~ 422 (422)
T PRK05431 397 YQQADGSVTIPEVLRPYMGGLEIIPK 422 (422)
T ss_pred CCCCCCCEECCHHHHHHCCCCEECCC
T ss_conf 64899888478131201698830889