HHsearch alignment for GI: 254780680 and conserved domain: PRK12420
>PRK12420 histidyl-tRNA synthetase; Provisional.
Probab=98.00 E-value=3.4e-05 Score=59.37 Aligned_cols=140 Identities=16% Similarity=0.183 Sum_probs=101.1
Q ss_pred EECCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHH-HHCHHHHHHHHHHH----HCCEECCCCCCHHHHHH
Q ss_conf 10564889999999999986223203202123562027889865-51422476776431----00023134541145445
Q gi|254780680|r 166 VLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT-GQIPKFADDMFCTT----DGRWLIPTSEVSLTNLY 240 (430)
Q Consensus 166 ~Lkg~~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gt-G~lp~f~~~~y~~~----d~l~Li~TaEvpL~~~~ 240 (430)
T Consensus 12 D~lp~e~~~~~~i~~~~~~~-~~~~Gy~~I~tP~~E~~elf~~~~g~~~~i~kemy~f~D~~gr~l~LRPe~Ta~iaR~~ 90 (421)
T PRK12420 12 DYLPEEQVLRNKIKRACEDT-FERYGCKPLETPTLNMYELMSYKYGGGDEILKEIYTLQDQGKRDLALRYDLTIPFAKVV 90 (421)
T ss_pred CCCHHHHHHHHHHHHHHHHH-HHHCCCEEEECCCCCHHHHHCCCCCCCCHHHHHEEEEECCCCCEEEECCCCCHHHHHHH
T ss_conf 78999999999999999999-99859947247650118764244788442241107888189987985677658999999
Q ss_pred HHHCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEE-EEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 34205955504208853221078843355434321222-2102002121278650145789899999999998410675
Q gi|254780680|r 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQ-HQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYR 318 (430)
Q Consensus 241 ~~~~l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~Rv-HQF~KVE~~~~~~pe~S~~~~e~~~~~~~~i~~~L~lpyR 318 (430)
T Consensus 91 a~~--~~~~~P~k~~y~g~vfR~erpq-----~GR~ReF~Q~G-vEiiG~~~~----~aDaEiI~la~~~l~~lgl~~~ 157 (421)
T PRK12420 91 AMN--PNIRLPFKRYEIGKVFRDGPIK-----QGRFREFIQCD-VDIVGVESV----MAEAELMSMAFELFRTLNLEVT 157 (421)
T ss_pred HHC--CCCCCCEEEEEECCEEECCCCC-----CCCCCEEEECC-EEEECCCCH----HHHHHHHHHHHHHHHHCCCCEE
T ss_conf 977--5777874588876778538987-----88555134357-542078877----8899999999999996598659