HHsearch alignment for GI: 254780680 and conserved domain: PRK12444
>PRK12444 threonyl-tRNA synthetase; Reviewed.
Probab=99.87 E-value=7.1e-22 Score=183.29 Aligned_cols=260 Identities=19% Similarity=0.363 Sum_probs=207.2
Q ss_pred CCCCCCHHHHCCCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHH
Q ss_conf 62112202211731000112221675301056488999999999998622320320212356202788986551422476
Q gi|254780680|r 138 SREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFAD 217 (430)
Q Consensus 138 ~k~H~elge~l~liDfe~a~kvsGsrF~~Lkg~~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~ 217 (430)
T Consensus 244 kRDHRklGkel~LF~f~~~----~pG~~fwlP~G~~i~~~le~~~r~~~-~~~GY~eV~TP~i~~~~Lw~~SGH~~~Y~e 318 (639)
T PRK12444 244 KRNHRKLGNELELFMFSEE----APGMPFYLPKGQIIRNELEAFLREIQ-KEYNYQEVRTPFMMNQELWERSGHWGHYKD 318 (639)
T ss_pred HCCHHHHHHHCCEEEECCC----CCCCEEEECCHHHHHHHHHHHHHHHH-HHCCCEEECCCEEEHHHHHHHCCHHHHHHH
T ss_conf 6478876532272882277----89744784678699999999999999-983987822866621568761660433330
Q ss_pred HHHHHH---HCCEECCCCCCHHHHHHHHHCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCC
Q ss_conf 776431---00023134541145445342059555042088532210788433554343212222102002121278650
Q gi|254780680|r 218 DMFCTT---DGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 (430)
Q Consensus 218 ~~y~~~---d~l~Li~TaEvpL~~~~~~~~l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~ 294 (430)
T Consensus 319 ~Mf~~~~d~~~~~lKPMNCP~H~~if~~~~rSYRdLPlR~aEfg~vhR~E~--SG-~L~GL~RVR~FtqDDAHIFct~dQ 395 (639)
T PRK12444 319 NMYFSEVDNKSFALKPMNCPGHMLMFKNKLHSYRELPIRMCEFGQVHRHEF--SG-ALNGLLRVRTFCQDDAHLFVTPEQ 395 (639)
T ss_pred CCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCHHHCCHHHHHCCCEECCCC--CC-CCCCCCCCCCCCCCCCEEECCHHH
T ss_conf 275545454033126768588999986056214436522243364633778--76-645767788998798246538899
Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHCCCHHHEEEEEEEEC--------------------CCCCCE-------
Q ss_conf 14578989999999999841067530378011784434024101101--------------------004833-------
Q gi|254780680|r 295 SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWL--------------------AGQNLY------- 347 (430)
Q Consensus 295 S~~~~e~~~~~~~~i~~~L~lpyRvv~~~sgdlg~~a~~~~DiE~w~--------------------P~~~~y------- 347 (430)
T Consensus 396 i~~Ei~~~~~~~~~vy~~fGf~~~-~~LStrp----ek~~G~de~W~~Ae~~L~~aL~~~g~~y~~~~GegAFYGPKiD~ 470 (639)
T PRK12444 396 IEDEIKSVMAQIDYVYKTFGFEYE-VELSTRP----EDSMGDDKLWEQAEAALENVLQSLNYKYRLNEGDGAFYGPKIDF 470 (639)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEE-EEECCCC----CCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEE
T ss_conf 999999999999999974797299-9816786----33458889999999999999997499758676863640326568
Q ss_pred ------EEEEEECC-CCCHH-HHHCCCEEECCCCCCCCEEEEECCCHH-HHHHHHHHHHHHCCCCCCCEECCCCCCCC
Q ss_conf ------23753102-10076-453268473389984101042004322-89999999988346899838658222310
Q gi|254780680|r 348 ------REISSCST-CGNFQ-SRRMNSRYRDPNSKSLKFTHTLNGSGV-AVGRCLIAILENYLNADGSVTIPTVLRPY 416 (430)
Q Consensus 348 ------~Ev~S~Sn-c~D~Q-srRl~iry~~~~~~~~~~~htlNgt~~-A~~R~l~ailEn~q~~dg~i~iP~~L~py 416 (430)
T Consensus 471 ~v~DalgR~wq~~TIQlDF~lPeRF~l~Y~~~dg~~-~rPVmIHRAilGS~ERFigiLiEh~~G-----~fP~WLaP~ 542 (639)
T PRK12444 471 HIKDALNRSHQCGTIQLDFQMPEKFDLNYIDEKNEK-VRPVVIHRAVLGSLDRFLAILIEHFGG-----AFPAWVAPV 542 (639)
T ss_pred EEEECCCCEEECCEEEEEECCHHHCCCEEECCCCCC-CCCEEEEECCCCCHHHHHHHHHHHCCC-----CCCCCCCCC
T ss_conf 998078872451234552056633587778789982-598899957877789999999997279-----898565720