HHsearch alignment for GI: 254780680 and conserved domain: PRK12820
>PRK12820 bifunctional aspartyl-tRNA synthetase/aspartyl/glutamyl-tRNA amidotransferase subunit C; Provisional.
Probab=95.90 E-value=0.098 Score=33.65 Aligned_cols=112 Identities=21% Similarity=0.332 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHC--HH-HHHHHHHHHHCCEECCCCCCHHHHHHHHHCCCHHH
Q ss_conf 9999999999986223203202123562027889865514--22-47677643100023134541145445342059555
Q gi|254780680|r 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI--PK-FADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKS 249 (430)
Q Consensus 173 ~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~l--p~-f~~~~y~~~d~l~Li~TaEvpL~~~~~~~~l~~~~ 249 (430)
T Consensus 157 ~~Rskv~~~iR~~-l~~~gF~EVETP~L~~s-tpEGArdflvPsr~~------~~~fyaLpQSPQ----ly-KQlLMvgG 223 (706)
T PRK12820 157 AKRHRIIKCARDF-LDSRGFLEIETPILTKS-TPEGARDYLVPSRIH------PKEFYALPQSPQ----LF-KQLLMIAG 223 (706)
T ss_pred HHHHHHHHHHHHH-HHHCCCEEEECCEECCC-CCCCCCCCCCCEECC------CCCEECCCCCHH----HH-HHHHHHCC
T ss_conf 9999999999999-98779889668704456-753245750024458------876500566829----99-99998628
Q ss_pred HCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEE-ECCCCCCHHHHHHHHHHH
Q ss_conf 04208853221078843355434321222210200212-127865014578989999
Q gi|254780680|r 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV-SITREEDSFTEHERMLSC 305 (430)
Q Consensus 250 LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~-~~~~pe~S~~~~e~~~~~ 305 (430)
T Consensus 224 ~-dRyFqIarcFRdEd~r-------~dRqPEFTqlDiEmSF~d~edvm~l~E~li~~ 272 (706)
T PRK12820 224 F-ERYFQLARCFRDEDLR-------PNRQPEFTQLDIEASFIDEEFIFELIEELTAR 272 (706)
T ss_pred C-CEEEEEEEEECCCCCC-------CCCCCCEEEEEEEHHCCCHHHHHHHHHHHHHH
T ss_conf 6-6179960011289999-------88798340687421348999999999999999