HHsearch alignment for GI: 254780680 and conserved domain: pfam01409
>pfam01409 tRNA-synt_2d tRNA synthetases class II core domain (F). Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only phenylalanyl-tRNA synthetases. This is the core catalytic domain.
Probab=97.37 E-value=0.0013 Score=47.52 Aligned_cols=188 Identities=19% Similarity=0.260 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHH-----HHHHHHHHH----CCEEC--CCCCCHHHHHHHHHCCCH
Q ss_conf 9999986223203202123562027889865514224-----767764310----00231--345411454453420595
Q gi|254780680|r 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKF-----ADDMFCTTD----GRWLI--PTSEVSLTNLYSHEIIES 247 (430)
Q Consensus 179 i~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f-----~~~~y~~~d----~l~Li--~TaEvpL~~~~~~~~l~~ 247 (430)
T Consensus 23 ~~~i~~~f-~~~GF~~~~g~eves~~~NFDaLn~P~dHPaR~~~DTfy~~~~~~~~~~vLRtHTS~~q~r~l~-----~~ 96 (243)
T pfam01409 23 LEEIRDIF-LSMGFEEVEGPEVESDFYNFDALNIPQDHPARDMQDTFYLKKPLKARRLLLRTHTTPVQARTLA-----EK 96 (243)
T ss_pred HHHHHHHH-HHCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCHHHHHHHH-----HC
T ss_conf 99999999-8779868769835642777775578988987676760343366667686576879889999997-----42
Q ss_pred HHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH-CCHHHHCCCCCHH
Q ss_conf 550420885322107884335543432122221020021212786501457898999999999984-1067530378011
Q gi|254780680|r 248 KSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRL-DLHYRVVSLCTGD 326 (430)
Q Consensus 248 ~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~S~~~~e~~~~~~~~i~~~L-~lpyRvv~~~sgd 326 (430)
T Consensus 97 ~~~p~r~~~~grvyR~d~~Da---tH----~~~FhQ~Eg~vvd~----~it~~~Lk~~l~~~~~~lfg~~~~~R~rp~-y 164 (243)
T pfam01409 97 NKPPIKIFSIGRVFRRDQVDA---TH----LPEFHQVEGLVVDE----NVSFADLKGVLEEFLRKFFGFEVKVRFRPS-Y 164 (243)
T ss_pred CCCCEEEECCCEEEECCCCCC---CC----CCEEEEEEEEEECC----CCCHHHHHHHHHHHHHHHCCCCCEEEECCC-C
T ss_conf 799848981431332588984---31----53105755789657----778999999999999997399737986788-6
Q ss_pred CCCHHHEEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCEEECCCCCCCCEEEEECCCHHHHHHHHHH
Q ss_conf 784434024101101004833237531021007645326847338998410104200432289999999
Q gi|254780680|r 327 LGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIA 395 (430)
Q Consensus 327 lg~~a~~~~DiE~w~P~~~~y~Ev~S~Snc~D~QsrRl~iry~~~~~~~~~~~htlNgt~~A~~R~l~a 395 (430)
T Consensus 165 FPFTe-PS~Evdv~~~~~~~WlEi~G~Gmv~p~vl~~~gid-----~~~~g~Af-----G~GlERlaMl 222 (243)
T pfam01409 165 FPFTE-PSAEVDVYCCKGGGWIEIGGAGMVHPNVLEAVGID-----EDYPGFAF-----GLGVERLAML 222 (243)
T ss_pred CCCCC-CCCEEEEEEECCCCEEEEEECCCCCHHHHHHCCCC-----CCCEEEEE-----EECHHHHHHH
T ss_conf 99999-86179999964997258750366678899866989-----89769998-----5348899999