HHsearch results for GI: 254780680 and protein with PDBid: 1h4v_B
>1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A
Probab=98.79 E-value=1e-08 Score=83.85 Aligned_cols=145 Identities=17% Similarity=0.195 Sum_probs=114.9
Q ss_pred CCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHH--HHCHHHHHHHHHHH----HCCEECCCCCCH
Q ss_conf 753010564889999999999986223203202123562027889865--51422476776431----000231345411
Q gi|254780680|r 162 ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGT--GQIPKFADDMFCTT----DGRWLIPTSEVS 235 (430)
Q Consensus 162 srF~~Lkg~~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gt--G~lp~f~~~~y~~~----d~l~Li~TaEvp 235 (430)
.||+.+-.+++++-..|.+|+.+. ..++||.+|.||.|-+.+++... |+...+.++||... +.+.|-|...+|
T Consensus 7 kG~~d~lP~g~~i~~~l~~~i~~~-~~~~Gy~~V~TP~ie~~dl~~~~~~~~~d~~~~~my~~~D~~g~~l~Lrpd~t~~ 85 (421)
T 1h4v_B 7 RGTKDLFGKELRMHQRIVATARKV-LEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTLRPEGTAA 85 (421)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHHHH-HHHTTCEECCCCSEEEGGGGCCCSCC------CCSCEEECTTSCEEEECCCSHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHH-HHHCCCEEEECCCCCCHHHHHCCCCCCCCHHHHHCEEEECCCCCEEEECCCCCHH
T ss_conf 987235988999999999999999-9985997988962150988633468632103664502466999888525767489
Q ss_pred HHHHHHHHCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 45445342059555042088532210788433554343212222102002121278650145789899999999998410
Q gi|254780680|r 236 LTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 (430)
Q Consensus 236 L~~~~~~~~l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~S~~~~e~~~~~~~~i~~~L~l 315 (430)
++-++...-.....+|+|++..++|||.|... +|.+|.+...-+|.|... +.....+++..+.+++..+++
T Consensus 86 ~~r~~~~~~~~~~~~p~k~y~~~~v~R~e~~~-----~g~~r~~~q~~~~i~~~~----~~~~~~e~~~~~~~~~~~~~~ 156 (421)
T 1h4v_B 86 MVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQ-----KGRYRQFHQVNYEALGSE----NPILDAEAVVLLYECLKELGL 156 (421)
T ss_dssp HHHHHHHTTGGGSSSSEEEEEEEEEECCCCC---------CCEEEEEEEEEESCC----CHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCEEECCCCC-----CCCEEEEEECCCEECCCC----CHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999985654047872699875535316788-----884145665062112454----326778999999999886076
Q ss_pred H
Q ss_conf 6
Q gi|254780680|r 316 H 316 (430)
Q Consensus 316 p 316 (430)
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T Consensus 157 ~ 157 (421)
T 1h4v_B 157 R 157 (421)
T ss_dssp C
T ss_pred C
T ss_conf 6