HHsearch results for GI: 254780680 and protein with PDBid: 1wle_A
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=100.00 E-value=0 Score=1207.03 Aligned_cols=425 Identities=29% Similarity=0.494 Sum_probs=408.9
Q ss_pred CCCHHHHHCCHHHHHHHHHHCCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH------HHHH
Q ss_conf 9884478519999999998469895---889999999999999999999999999999999998644998------7999
Q gi|254780680|r 1 MLDIQWIRQNPEHLDIALKKRHLEP---QSEYILSLDEKNRILIKKIEDIRARRNSNSAQIGQAIAEGNL------SLVD 71 (430)
Q Consensus 1 MLDik~IRen~e~v~~~l~~R~~~~---~id~il~Ld~~rr~l~~e~e~LraerN~lSKeIg~~k~~~~~------~~~~ 71 (430)
|||||+||+|||.|+++|++|++++ ++|+|+++|++||++++++++||++||++||+||++++++++ ++++
T Consensus 40 MLDik~Irenpe~v~~~l~~R~~~~~~~dld~il~ld~e~r~l~~e~e~Lr~erN~~sk~I~~l~~~~~~~~~~~~~e~e 119 (501)
T 1wle_A 40 LLDMESLCAYPEDAARALDLRKGELRSKDLPGIISTWQELRQLREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQ 119 (501)
T ss_dssp CCCHHHHHHSHHHHHHHHHHHTCSCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTGGGCHHHH
T ss_pred CCCHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHH
T ss_conf 62799987699999999997289743342999999999999999999999999999999999998567751000368999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCC
Q ss_conf 99999999998864446666677888774431002258811221135554024200015656656662112202211731
Q gi|254780680|r 72 ALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIHLSREHFEIGEALGLM 151 (430)
Q Consensus 72 ~Lk~e~~~Lk~eik~le~~~~~le~el~~lll~IPNi~~~~VP~G~de~dNv~i~~~G~~~~f~f~~k~H~elge~l~li 151 (430)
+|++++++|+++++.+++++++++++++.+++.|||+||++||+| +|++|++|++||++|.|+|+||+|||||+.+|++
T Consensus 120 ~L~~~~k~lk~~i~~le~~~~~l~~~l~~~ll~iPNi~~~~VP~G-~e~~n~vv~~~G~~~~f~f~pk~H~elge~l~li 198 (501)
T 1wle_A 120 SLRARGREIRKQLTLLYPKEAQLEEQFYLRALRLPNQTHPDVPVG-DESQARVLHVVGDKPAFSFQPRGHLEIAEKLDII 198 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCTTCCCS-SGGGCEEEEEESCCCCCSSCCCCHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 999999999999999999999999999999974899888557989-8776879840378647888852167776653120
Q ss_pred CHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHHHH-----HCC
Q ss_conf 000112221675301056488999999999998622320320212356202788986551422476776431-----000
Q gi|254780680|r 152 DFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT-----DGR 226 (430)
Q Consensus 152 Dfe~a~kvsGsrF~~Lkg~~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~~~-----d~l 226 (430)
||++|+||||||||||+|+||+|||||+|||+|++. ++||++|+||+|||+++|+||||+|+|++++|... +++
T Consensus 199 Dfe~aakvsGsrfy~LkG~~A~LerALi~f~ld~l~-~~Gy~~v~pP~iV~~~~~~gtGqlPkfe~~~~~~~~~~~~ddl 277 (501)
T 1wle_A 199 RQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLNKLI-HRGFTPMTVPDLLRGVVFEGCGMTPNAKPSQIYNIDPSRFEDL 277 (501)
T ss_dssp ECTTCTTTTCTTCCEEETHHHHHHHHHHHHHHHHHH-HTTCEEEECCSEECHHHHHHHTCCSSSSSCSSCBBCTTTSSSC
T ss_pred CHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHHH-HCCCEEEECHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCE
T ss_conf 133200354787189828299999999999999755-2598899243550166775542484343122777404432220
Q ss_pred EECCCCCCHHHHHHHHHCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCC--CCHHHHHHHHHH
Q ss_conf 231345411454453420595550420885322107884335543432122221020021212786--501457898999
Q gi|254780680|r 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLS 304 (430)
Q Consensus 227 ~Li~TaEvpL~~~~~~~~l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~p--e~S~~~~e~~~~ 304 (430)
||||||||||+|||+|+||+.++||+||+|+|||||+||| +|||||||||||||+|||||+||+| |+|+++|++|+.
T Consensus 278 ~LipTAEvpL~~~~~~eil~~~~LPik~~a~s~CFR~EAG-~GkdtrGl~RvHQF~KVE~f~~~~p~~e~s~~~~e~~l~ 356 (501)
T 1wle_A 278 NLAGTAEVGLAGYFMDHSVAFRDLPIRMVCSSTCYRAETD-TGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSELLEEFLS 356 (501)
T ss_dssp EECSSHHHHHHHHHTTEEEEGGGCSEEEEEEEEEECCCCS-CC--CCSSSSCSEEEEEEEEEEECSSHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHH
T ss_conf 0103223453202343203200087114312773055634-456776722566214268999836870133999999999
Q ss_pred HHHHHHHHHCCHHHHCCCCCHHCCCHHHEEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCEEECCCCCCCCEEEEECC
Q ss_conf 99999998410675303780117844340241011010048332375310210076453268473389984101042004
Q gi|254780680|r 305 CAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNG 384 (430)
Q Consensus 305 ~~~~i~~~L~lpyRvv~~~sgdlg~~a~~~~DiE~w~P~~~~y~Ev~S~Snc~D~QsrRl~iry~~~~~~~~~~~htlNg 384 (430)
++++||++||||||||+|||||||++|+||||||||||||++|+|||||||||||||||||||||+++++ ++|||||||
T Consensus 357 ~~e~il~~L~LpyRvv~~~sgDLg~~a~kkyDiE~W~P~~~~y~EvsS~Snc~DfQaRRl~iry~~~~~k-~~~~HTLNg 435 (501)
T 1wle_A 357 LQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMFQTEAGE-LQFAHTVNA 435 (501)
T ss_dssp HHHHHHHHTTCCEEEEECCGGGSTTTCSEEEEEEEEETTTTEEEEEEEEEECTTHHHHHHTCEEECSSSC-EEECEEEEE
T ss_pred HHHHHHHHCCCCEEEEECCCCCCCHHHHHEEEEEEEECCCCCEEEEEEEECCCCHHHHHCCCEEECCCCC-EEEEEECCC
T ss_conf 9999986448854998716777674344457689985588976778877031338663036644079998-556464437
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCEEEECCCCCC
Q ss_conf 322899999999883468998386582223101880130733457
Q gi|254780680|r 385 SGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKKEHIL 429 (430)
Q Consensus 385 t~~A~~R~l~ailEn~q~~dg~i~iP~~L~pym~g~~~i~~~~~~ 429 (430)
|||||||+|+||||||||+||||+||+||||||||..+|.|++.+
T Consensus 436 T~lAv~R~l~ailEn~q~~dGsv~iP~~L~pymg~~~i~~p~~~p 480 (501)
T 1wle_A 436 TGCAVPRLLIALLESYQQKDGSVLVPPALQPYLGTDRITTPTHVP 480 (501)
T ss_dssp EEEEHHHHHHHHHHHHBCTTSCEECCGGGHHHHSSSEECCCSSCC
T ss_pred CHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHCCCCEECCCCCCC
T ss_conf 415887899998873648998386781325464996752778887