HHsearch results for GI: 254780680 and protein with PDBid: 1wu7_A
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1
Probab=98.13 E-value=1.4e-05 Score=60.50 Aligned_cols=140 Identities=17% Similarity=0.254 Sum_probs=96.6
Q ss_pred CCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHHHH----HCCEECCCCCCHHHH
Q ss_conf 5301056488999999999998622320320212356202788986551422476776431----000231345411454
Q gi|254780680|r 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTN 238 (430)
Q Consensus 163 rF~~Lkg~~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~~~----d~l~Li~TaEvpL~~ 238 (430)
||..+...++.+.+.|.+++.+. ..++||.+|.||.+-+.+++...+. +....+||... ..+.|-|-.-.|++-
T Consensus 11 G~~d~lP~g~~~~~~i~~~i~~~-~~~~Gy~eV~tP~ie~~dl~~~~~g-~~~~~~m~~~~d~~g~~l~Lrpd~t~~~~r 88 (434)
T 1wu7_A 11 GFRDFYPEDMDVEKFIFKTAEEA-AEAFGFRRIDFPSLEYLDLYRIKSG-EELLQQTYSFVDKGGREVTLIPEATPSTVR 88 (434)
T ss_dssp TCCCBCHHHHHHHHHHHHHHHHH-HHHTTCEECBCCSEEETHHHHTTSC-TTGGGGSCEEECTTSCEEEECSCSHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHH-HHHCCCEEEECCCCCCHHHHCCCCC-CHHHHHHEEEECCCCCEECCCCCCCHHHHH
T ss_conf 87635987999999999999999-9985997998873162765065787-502342114445899785137667999999
Q ss_pred HHHHHCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 45342059555042088532210788433554343212222102002121278650145789899999999998410
Q gi|254780680|r 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDL 315 (430)
Q Consensus 239 ~~~~~~l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~S~~~~e~~~~~~~~i~~~L~l 315 (430)
++... ...++|+|++.++++||.|.-.. |-+|...---+|++..... ....+.+..+.+.+..+++
T Consensus 89 ~~~~~--~~~~~p~k~~~~~~v~r~~~~~~-----~~~r~~~q~g~e~~g~~~~----~~~~~~~~~~~~~~~~~~~ 154 (434)
T 1wu7_A 89 MVTSR--KDLQRPLRWYSFPKVWRYEEPQA-----GRYREHYQFNADIFGSDSP----EADAEVIALASSILDRLGL 154 (434)
T ss_dssp HHTTC--TTCCSSEEEEECCEEECCCCSCS-----SCCSEEEEEEEEEESCCSH----HHHHHHHHHHHHHHHHTTT
T ss_pred HHHHH--HCCCCCEEEECCCCEEEECCCCC-----CCCCEEEECCEEECCCCCH----HHHHHHHHHHHHHHHHCCC
T ss_conf 99764--12678616741387454046667-----7542146632785376521----6679999999999753177