HHsearch results for GI: 254780680 and protein with PDBid: 2i4l_A
>2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A*
Probab=99.81 E-value=4e-19 Score=161.22 Aligned_cols=256 Identities=19% Similarity=0.241 Sum_probs=212.1
Q ss_pred HCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHHHH----HCCEECCCCCC
Q ss_conf 21675301056488999999999998622320320212356202788986551422476776431----00023134541
Q gi|254780680|r 159 LSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEV 234 (430)
Q Consensus 159 vsGsrF~~Lkg~~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~~~----d~l~Li~TaEv 234 (430)
-+++|+|.+--.|+++-+.+.+++-+. ..+.||.+|.+|.|...++...+|++..|.++||... .++.|-||.|-
T Consensus 54 ~~~~G~y~~lPlG~~v~~kIe~~ir~~-~~~~G~~EI~tP~l~~~eLw~~Sg~~d~~~~em~~~~dr~~r~~~l~p~~~~ 132 (458)
T 2i4l_A 54 QEAAGIYAWLPLGHRVLKKIEQIVREE-QNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEE 132 (458)
T ss_dssp EEETTEEEECHHHHHHHHHHHHHHHHH-HHHTTCEECBCCSEEEHHHHHHHTHHHHSCTTSEEEECTTCCEEEECSCCHH
T ss_pred CCCCCCEEECHHHHHHHHHHHHHHHHH-HHHCCCEEEECCCCCCHHHHHHCCCHHCCCCCCCCCCCCCCCEEECCCCCCC
T ss_conf 068865078810899999999999999-9986998998887387689876177100462112110124200002667870
Q ss_pred HHHHHHHHHCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCC-CHHHHHHHHHHHHHHHHHHH
Q ss_conf 14544534205955504208853221078843355434321222210200212127865-01457898999999999984
Q gi|254780680|r 235 SLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREE-DSFTEHERMLSCAEEILKRL 313 (430)
Q Consensus 235 pL~~~~~~~~l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe-~S~~~~e~~~~~~~~i~~~L 313 (430)
+.+.++..++..+.+||+++.-+++|||.|.... .|+.|++||..-+..+|+.++ +....++.|......++..+
T Consensus 133 ~~~~~~~~~~~sy~~lP~~lyqi~~~fR~E~~~~----~gl~r~ref~~~d~~sf~~~~~~~~~~~~~~~~~y~~i~~~~ 208 (458)
T 2i4l_A 133 MITEIFRAYIKSYKSLPLNLYHIQWKFRDEQRPR----FGVMRGREFLMKDAYSFDVDEAGARKSYNKMFVAYLRTFARM 208 (458)
T ss_dssp HHHHHHHHHCCBGGGCSEEEEEEEEEECCCSSCB----TGGGBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCCCCCCCCEECCCEEECCCCCCC----CCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 5658987633443226854000545764546775----344378997874155555228889999999999999999974
Q ss_pred CCHHHHCCCCCHHCCCHHHEEEEEEE--------------E--CC-----------------------------------
Q ss_conf 10675303780117844340241011--------------0--10-----------------------------------
Q gi|254780680|r 314 DLHYRVVSLCTGDLGFSACKTYDLEV--------------W--LA----------------------------------- 342 (430)
Q Consensus 314 ~lpyRvv~~~sgdlg~~a~~~~DiE~--------------w--~P----------------------------------- 342 (430)
+|+++.|...+|.+|...+..|...+ + .|
T Consensus 209 ~l~~~~v~~~~~~~g~~~s~Ef~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (458)
T 2i4l_A 209 GLKAIPMRAETGPIGGDLSHEFIVLAETGESGVYIDRDVLNLPVPDENVDYDGDLTPIIKQWTSVYAATEDVHEPARYES 288 (458)
T ss_dssp TCCEEEEECCCCSSCSSCEEEEEEECTTCSEEEEEEGGGGGCCCCCTTCCTTSCCHHHHHHHHHSCEEETTTCCTTHHHH
T ss_pred CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCHHHCCC
T ss_conf 98426787336777765349999876443556666544435678873444344443114445553032233122000241
Q ss_pred -------CCCCEEEEEEECCCCCHHHHHCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCC
Q ss_conf -------0483323753102100764532684733899841010420043228999999998834689983865822231
Q gi|254780680|r 343 -------GQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRP 415 (430)
Q Consensus 343 -------~~~~y~Ev~S~Snc~D~QsrRl~iry~~~~~~~~~~~htlNgt~~A~~R~l~ailEn~q~~dg~i~iP~~L~p 415 (430)
...+-.|+...-.+++.-|..++.+|.+..|+. +.+|.- +.++-+.|+++|++|.+-.+.| +..|..+-|
T Consensus 289 ~~~~~~~~~~rgie~g~~f~lg~~~s~~~~~~~~~~~g~~-~~~~~g-~~giGieRli~~~~e~~~d~~g-l~~p~~lAP 365 (458)
T 2i4l_A 289 EVPEANRLNTRGIEVGQIFYFGTKYSDSMKANVTGPDGTD-APIHGG-SYGVGVSRLLGAIIEACHDDNG-IIWPEAVAP 365 (458)
T ss_dssp HSCTTTEEEEEEEEEEEEEEEETHHHHHTTCEEECTTSCE-EECEEE-EEEEEHHHHHHHHHHHSEETTE-ECCCTTTCS
T ss_pred CCCHHHHCCCEEEEECCCEECCCCCHHHCCCEEECCCCCE-EEEEEE-ECCCCHHHHHHHHHHHHCCCCC-CCCCCCCCC
T ss_conf 3661330574279972714327411121485465578977-768999-6267347888877775157665-212455677
Q ss_pred CCCCEEEEC
Q ss_conf 018801307
Q gi|254780680|r 416 YMNNLAVIK 424 (430)
Q Consensus 416 ym~g~~~i~ 424 (430)
|= ..+|+
T Consensus 366 ~~--v~Iip 372 (458)
T 2i4l_A 366 FR--VTILN 372 (458)
T ss_dssp CS--EEEEE
T ss_pred CE--EEEEE
T ss_conf 65--99996