HHsearch results for GI: 254780680 and protein with PDBid: 2j3l_A
>2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- tRNA synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A*
Probab=99.74 E-value=3.5e-17 Score=146.85 Aligned_cols=182 Identities=21% Similarity=0.243 Sum_probs=155.6
Q ss_pred CCCCCHHHHCCCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHH
Q ss_conf 21122022117310001122216753010564889999999999986223203202123562027889865514224767
Q gi|254780680|r 139 REHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADD 218 (430)
Q Consensus 139 k~H~elge~l~liDfe~a~kvsGsrF~~Lkg~~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~ 218 (430)
++|- |..+.|.+- -++||||.+--.|++|-+.|+++.-+. ..+.||.+|..|.|...+++.++||+.+|.|.
T Consensus 21 ~~~~-l~~r~g~i~------~~~aGlydygP~G~~lk~~I~~~wr~~-~~~~g~~EV~~P~i~p~~V~kaSGHvd~F~D~ 92 (572)
T 2j3l_A 21 LSHQ-ILLRAGYIR------QVAAGIYSYLPLANRVLEKLKTIMREE-FEKIDAVEMLMPALLPAELWKESGRYETYGPN 92 (572)
T ss_dssp HHHH-HHHHTTSEE------EEETTEEEECHHHHHHHHHHHHHHHHH-HHTTTCEECBCCSEEETHHHHHHSHHHHSCTT
T ss_pred HHHH-HHHHCCCCC------CCCCCCCEECCHHHHHHHHHHHHHHHH-HHHCCCEEEECCCCCCHHHHHHCCCCCCCCCC
T ss_conf 3279-998758875------368816272362999999999999999-99869989989750888999860985536667
Q ss_pred HHHHHH----CCEECCCCCCHHHHHHHHHCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCC
Q ss_conf 764310----0023134541145445342059555042088532210788433554343212222102002121278650
Q gi|254780680|r 219 MFCTTD----GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREED 294 (430)
Q Consensus 219 ~y~~~d----~l~Li~TaEvpL~~~~~~~~l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~ 294 (430)
||...| +++|-||.|...+.++.+++..+.+||+++..+++.||.|.++ ..|+.|+.+|...+++.|+.+.+
T Consensus 93 M~~~~d~~~~~~~l~p~~e~~~~~~~~~~~~s~~~lp~~~~~~~~~~r~e~~~----~~g~~r~~ef~~~~~~~~~~~~~ 168 (572)
T 2j3l_A 93 LYRLKDRNDRDYILGPTHEETFTELIRDEINSYKRLPLNLYQIQTKYRDEKRS----RSGLLRGREFIMKDGYSFHADEA 168 (572)
T ss_dssp SCEEECTTCCEEEECSCCHHHHHHHHHHHCCBGGGCCEEEEEEEEEECCCSSC----CTGGGSCSEEEEEEEEEEESSHH
T ss_pred EEEEEECCCCEEEECCCCCHHHHHHHHHHHCCHHHCCHHHHHCCCCCCCCCCC----CCCCCCCCHHEECCCCCCCCCCC
T ss_conf 07878469876876788725778998751113654608887425523555577----66655421100011441035621
Q ss_pred -HHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHCCCHHH
Q ss_conf -14578989999999999841067530378011784434
Q gi|254780680|r 295 -SFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSAC 332 (430)
Q Consensus 295 -S~~~~e~~~~~~~~i~~~L~lpyRvv~~~sgdlg~~a~ 332 (430)
..+..+.+......+|..++++|..+....+.+|...+
T Consensus 169 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 207 (572)
T 2j3l_A 169 SLDQSYRDYEKAYSRIFERCGLEFRAIIGDGGAMGGKDS 207 (572)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGTCSSE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCC
T ss_conf 157888889999999987417521011210354566755