HHsearch results for GI: 254780680 and protein with PDBid: 2odr_B

>2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2}
Probab=97.31  E-value=0.00072  Score=47.90  Aligned_cols=182  Identities=11%  Similarity=0.101  Sum_probs=104.3

Q ss_pred             HHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHH---HHHCCEECCCCCCHHHHHHHHHCCCHHHH
Q ss_conf             999999999986223203202123562027889865514224767764---31000231345411454453420595550
Q gi|254780680|r  174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC---TTDGRWLIPTSEVSLTNLYSHEIIESKSL  250 (430)
Q Consensus       174 Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~---~~d~l~Li~TaEvpL~~~~~~~~l~~~~L  250 (430)
                      ++.-+-.+.+...+...||.++.+-.++..+...--  ++ ....++.   +..++-+.-|+=.|-.--......+....
T Consensus       147 ~~~~~~~~k~r~~l~~~G~~Evitysfv~~~~~~~~--~~-~~~~v~l~NPisSe~~vLRTh~~~gll~~l~~n~~r~~~  223 (648)
T 2odr_B          147 LQKILHGYKKGTLDGDDLVLEISNALEISSEMGLKI--LE-DVFPEFKDLTAVSSKLTLRSHMTSGWFLTVSDLMNKKPL  223 (648)
T ss_dssp             ----------------------------------------------CCCCCCBCCSEEECCCTHHHHHHHHHHHTTTSCS
T ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHC--CC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf             356666655302222034000321023463443202--56-555211358553235565887746899999999857999


Q ss_pred             CCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHCC-C
Q ss_conf             420885322107884335543432122221020021212786501457898999999999984106753037801178-4
Q gi|254780680|r  251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG-F  329 (430)
Q Consensus       251 Pik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~S~~~~e~~~~~~~~i~~~L~lpyRvv~~~sgdlg-~  329 (430)
                      |+|+...++|||+++..   |..   +..+|+-+|-+.+-.    .--+..+....+.+++.|+++---+..-...-. +
T Consensus       224 pirlFEiGrVFR~D~~~---D~t---H~~~fhQleGlivg~----~vdf~dLKg~le~lL~~Lg~~~~k~r~~~s~~Pf~  293 (648)
T 2odr_B          224 PFKLFSIDRCFRREQKE---DKS---HLMTYHSASCAIAGE----GVDINDGKAIAEGLLSQFGFTNFKFIPDEKKSKYY  293 (648)
T ss_dssp             CEEEEEEEEEECCCSCC---CSS---CCSEEEEEEEEEECT----TCCHHHHHHHHHHHHHTTTCCCEEEEECTTCCTTB
T ss_pred             CEEEEEEEEEECCCCCC---CCC---CCCCEEEEEEEEECC----CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
T ss_conf             83899877787378744---243---576200478999778----76889999999999999678873899656778998


Q ss_pred             HHHEEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCEE
Q ss_conf             434024101101004833237531021007645326847
Q gi|254780680|r  330 SACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY  368 (430)
Q Consensus       330 ~a~~~~DiE~w~P~~~~y~Ev~S~Snc~D~QsrRl~iry  368 (430)
                      --++..||++|.|..+.|.||..|.-..-=-.+.++|.|
T Consensus       294 hPg~ea~V~~~~~~~~~WlEIgg~G~vHP~VLk~~GId~  332 (648)
T 2odr_B          294 TPETQTEVYAYHPKLKEWLEVATFGVYSPVALSKYGIDV  332 (648)
T ss_dssp             CTTCCEEEEEEETTTTEEEEEEEEEEBCHHHHHHTTCCS
T ss_pred             CCCEEEEEEEEECCCCEEEEEEECCCCCHHHHHHCCCCC
T ss_conf             991158999981679848999806531799998669698