HHsearch results for GI: 254780680 and protein with PDBid: 2odr_B
>2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2}
Probab=97.31 E-value=0.00072 Score=47.90 Aligned_cols=182 Identities=11% Similarity=0.101 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHH---HHHCCEECCCCCCHHHHHHHHHCCCHHHH
Q ss_conf 999999999986223203202123562027889865514224767764---31000231345411454453420595550
Q gi|254780680|r 174 LERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC---TTDGRWLIPTSEVSLTNLYSHEIIESKSL 250 (430)
Q Consensus 174 Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~---~~d~l~Li~TaEvpL~~~~~~~~l~~~~L 250 (430)
++.-+-.+.+...+...||.++.+-.++..+...-- ++ ....++. +..++-+.-|+=.|-.--......+....
T Consensus 147 ~~~~~~~~k~r~~l~~~G~~Evitysfv~~~~~~~~--~~-~~~~v~l~NPisSe~~vLRTh~~~gll~~l~~n~~r~~~ 223 (648)
T 2odr_B 147 LQKILHGYKKGTLDGDDLVLEISNALEISSEMGLKI--LE-DVFPEFKDLTAVSSKLTLRSHMTSGWFLTVSDLMNKKPL 223 (648)
T ss_dssp ----------------------------------------------CCCCCCBCCSEEECCCTHHHHHHHHHHHTTTSCS
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHC--CC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 356666655302222034000321023463443202--56-555211358553235565887746899999999857999
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHCC-C
Q ss_conf 420885322107884335543432122221020021212786501457898999999999984106753037801178-4
Q gi|254780680|r 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLG-F 329 (430)
Q Consensus 251 Pik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~S~~~~e~~~~~~~~i~~~L~lpyRvv~~~sgdlg-~ 329 (430)
|+|+...++|||+++.. |.. +..+|+-+|-+.+-. .--+..+....+.+++.|+++---+..-...-. +
T Consensus 224 pirlFEiGrVFR~D~~~---D~t---H~~~fhQleGlivg~----~vdf~dLKg~le~lL~~Lg~~~~k~r~~~s~~Pf~ 293 (648)
T 2odr_B 224 PFKLFSIDRCFRREQKE---DKS---HLMTYHSASCAIAGE----GVDINDGKAIAEGLLSQFGFTNFKFIPDEKKSKYY 293 (648)
T ss_dssp CEEEEEEEEEECCCSCC---CSS---CCSEEEEEEEEEECT----TCCHHHHHHHHHHHHHTTTCCCEEEEECTTCCTTB
T ss_pred CEEEEEEEEEECCCCCC---CCC---CCCCEEEEEEEEECC----CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
T ss_conf 83899877787378744---243---576200478999778----76889999999999999678873899656778998
Q ss_pred HHHEEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCEE
Q ss_conf 434024101101004833237531021007645326847
Q gi|254780680|r 330 SACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRY 368 (430)
Q Consensus 330 ~a~~~~DiE~w~P~~~~y~Ev~S~Snc~D~QsrRl~iry 368 (430)
--++..||++|.|..+.|.||..|.-..-=-.+.++|.|
T Consensus 294 hPg~ea~V~~~~~~~~~WlEIgg~G~vHP~VLk~~GId~ 332 (648)
T 2odr_B 294 TPETQTEVYAYHPKLKEWLEVATFGVYSPVALSKYGIDV 332 (648)
T ss_dssp CTTCCEEEEEEETTTTEEEEEEEEEEBCHHHHHHTTCCS
T ss_pred CCCEEEEEEEEECCCCEEEEEEECCCCCHHHHHHCCCCC
T ss_conf 991158999981679848999806531799998669698