HHsearch results for GI: 254780680 and protein with PDBid: 2odr_D
>2odr_D Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2}
Probab=97.20 E-value=0.00083 Score=47.43 Aligned_cols=169 Identities=11% Similarity=0.088 Sum_probs=98.1
Q ss_pred HHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHHH---HHCCEECCCCCCHHHHHHHHHCCCHHHHCCEEEEEECCCCC
Q ss_conf 232032021235620278898655142247677643---10002313454114544534205955504208853221078
Q gi|254780680|r 187 TSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT---TDGRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRS 263 (430)
Q Consensus 187 ~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~~---~d~l~Li~TaEvpL~~~~~~~~l~~~~LPik~~~~s~cfR~ 263 (430)
+...||.++.+-.++.++...-- ++ .....+.. ..++-+.=|+=.|-..-......+....|+|+...++|||+
T Consensus 160 l~~~G~~EvitySFvs~~~~~~l--~~-~~~~i~L~NPisse~svLRThtspgll~~l~~n~~r~~~piRlFEiGrVFR~ 236 (685)
T 2odr_D 160 DGDDLVLEISNALEISSEMGLKI--LE-DVFPEFKDLTAVSSKLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRR 236 (685)
T ss_dssp ---------------------------------CCCCCCBCCSEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECC
T ss_pred HHCCCCEEEEEECCCCHHHHHHC--CC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEC
T ss_conf 10245102442113473454321--56-6562002585520255758877467999999998479998489964677705
Q ss_pred CCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHCCC-HHHEEEEEEEECC
Q ss_conf 843355434321222210200212127865014578989999999999841067530378011784-4340241011010
Q gi|254780680|r 264 EAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDLGF-SACKTYDLEVWLA 342 (430)
Q Consensus 264 EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~S~~~~e~~~~~~~~i~~~L~lpyRvv~~~sgdlg~-~a~~~~DiE~w~P 342 (430)
|..+ |... ..+|+.+|-+.+-. .--+..+-...+.+++.|+++---+..-...-.+ --++.-|+++|-|
T Consensus 237 D~i~---DatH---l~efhQleGlivg~----~Vdf~DLKgiLE~lL~~Lg~~~vkfr~~~s~~Pf~hPg~eaeV~~~~~ 306 (685)
T 2odr_D 237 EQKE---DKSH---LMTYHSASCAIAGE----GVDINDGKAIAEGLLSQFGFTNFKFIPDEKKSKYYTPETQTEVYAYHP 306 (685)
T ss_dssp CSCC---CSSC---CSEEEEEEEEEECT----TCCHHHHHHHHHHHHHTTTCCCEEEEECTTCCTTBCTTCCEEEEEEET
T ss_pred CCCC---CCCC---CCCEEEEEEEEEEC----CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEECC
T ss_conf 7754---4545---76314589999967----747999999999999986788739996667788879950279999806
Q ss_pred CCCCEEEEEEECCCCCHHHHHCCCEE
Q ss_conf 04833237531021007645326847
Q gi|254780680|r 343 GQNLYREISSCSTCGNFQSRRMNSRY 368 (430)
Q Consensus 343 ~~~~y~Ev~S~Snc~D~QsrRl~iry 368 (430)
..+.|.||..|.-.--=..+.++|.|
T Consensus 307 ~~~~WlEIgg~G~vhP~VLk~~GId~ 332 (685)
T 2odr_D 307 KLKEWLEVATFGVYSPVALSKYGIDV 332 (685)
T ss_dssp TTTEEEEEEEEEEBCHHHHHHTTCCS
T ss_pred CCCEEEEEEECCCCCHHHHHHCCCCC
T ss_conf 79838999806650799998769798