HHsearch results for GI: 254780680 and protein with PDBid: 2zin_A

>2zin_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, pyrrolysine, ATP analogue, non-natural amino acid, unnatural amino acid, ATP-binding; HET: ANP LBY; 1.79A {Methanosarcina mazei} PDB: 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A*
Probab=99.06  E-value=3.2e-09  Score=87.69  Aligned_cols=208  Identities=19%  Similarity=0.237  Sum_probs=141.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHH--HHHHHHHHHHCCEECCCCCCHHHHHHHHHCCCH
Q ss_conf             488999999999998622320320212356202788986551422--476776431000231345411454453420595
Q gi|254780680|r  170 HLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK--FADDMFCTTDGRWLIPTSEVSLTNLYSHEIIES  247 (430)
Q Consensus       170 ~~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~--f~~~~y~~~d~l~Li~TaEvpL~~~~~~~~l~~  247 (430)
                      ..+.+++++-+|+.     .+||.+|.+|.|...+.....|..+.  +...++..+.+++|-|+...++..++....-. 
T Consensus        79 ~~~~i~~~ir~~f~-----~~Gf~EV~TP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~-  152 (291)
T 2zin_A           79 YLGKLEREITRFFV-----DRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRVDKNFCLRPMLAPNLYNYLRKLDRA-  152 (291)
T ss_dssp             HHHHHHHHHHHHHH-----HTTCEEECCCSEEETHHHHHTTCCTTSSGGGGCCEETTTEEECSCSHHHHHHHHHHHTTT-
T ss_pred             HHHHHHHHHHHHHH-----HCCCEEEECCCEEEECCCCCCCCCCCCCCCCCEECCCCHHCCCCCCCCCHHHHHHHHHHH-
T ss_conf             99999999999999-----887999976522331220136888774121213257801126642345145777877652-


Q ss_pred             HHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHC
Q ss_conf             55042088532210788433554343212222102002121278650145789899999999998410675303780117
Q gi|254780680|r  248 KSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLHYRVVSLCTGDL  327 (430)
Q Consensus       248 ~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~S~~~~e~~~~~~~~i~~~L~lpyRvv~~~sgdl  327 (430)
                      ...|+|++.+++|||.|....       -|..+|+.+|...+-    +...++.+....+++++.|++.|+++.-...-.
T Consensus       153 ~~~p~r~f~ig~vfR~e~~~~-------~h~~eF~q~e~~~~~----~~~~~~dl~~~~~~~l~~lg~~~~~~~~~~~~~  221 (291)
T 2zin_A          153 LPDPIKIFEIGPCYRKESDGK-------EHLEEFTMLNFCQMG----SGCTRENLESIITDFLNHLGIDFKIVGDSCMVY  221 (291)
T ss_dssp             SCSSEEEEEEEEEECCCSCSS-------SCCSEEEEEEEEEES----TTCCHHHHHHHHHHHHHHHTCCCEEECC-----
T ss_pred             CCCCCEEEEECCEEEECCCCC-------CCCCCEEEEEEEEEC----CCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf             133402466410122034567-------888863899999989----999799999999999998599278713665676


Q ss_pred             CCHHHEEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCE
Q ss_conf             84434024101101004833237531021007645326847338998410104200432289999999988346899838
Q gi|254780680|r  328 GFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV  407 (430)
Q Consensus       328 g~~a~~~~DiE~w~P~~~~y~Ev~S~Snc~D~QsrRl~iry~~~~~~~~~~~htlNgt~~A~~R~l~ailEn~q~~dg~i  407 (430)
                          ....|  +    ...|.|+.++.-.....-+.++|-      + ..+.+     ++.+.|+..+.   +...|  |
T Consensus       222 ----~~~~~--~----~~~~~ei~~~~~~~~~v~~~~gid------~-p~~~~-----g~g~erla~~~---~~~~d--i  274 (291)
T 2zin_A          222 ----GDTLD--V----MHGDLELSSAVVGPIPLDREWGID------K-PWIGA-----GFGLERLLKVK---HDFKN--I  274 (291)
T ss_dssp             ----CEEEE--E----EETTEEEEEEEESCCGGGGGGTCC------S-CEEEE-----EEEHHHHHHHH---TTCSS--G
T ss_pred             ----CCCCC--C----CCCCEEEECCCEECHHHHHHCCCC------C-CEEEE-----CCCHHHHHHHH---CCCCC--H
T ss_conf             ----76602--1----668757403860169999866999------9-81886-----75899999875---29993--4


Q ss_pred             ECCCCCCCCCCCEE
Q ss_conf             65822231018801
Q gi|254780680|r  408 TIPTVLRPYMNNLA  421 (430)
Q Consensus       408 ~iP~~L~pym~g~~  421 (430)
                      +..+---.|.+|++
T Consensus       275 r~~~r~~~y~~Gie  288 (291)
T 2zin_A          275 KRAARSGSYYNGIS  288 (291)
T ss_dssp             GGGSSCSSEETTEE
T ss_pred             HHHHHHHCEECCEE
T ss_conf             55541230006502