HHsearch results for GI: 254780680 and protein with PDBid: 3a5y_A
>3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A*
Probab=97.01 E-value=0.00074 Score=47.82 Aligned_cols=138 Identities=15% Similarity=0.205 Sum_probs=77.8
Q ss_pred HHHHHHHCCCCCEEEC--CHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHH----HHHCC
Q ss_conf 0011222167530105--64889999999999986223203202123562027889865514224767764----31000
Q gi|254780680|r 153 FDRATKLSGARFSVLT--GHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFC----TTDGR 226 (430)
Q Consensus 153 fe~a~kvsGsrF~~Lk--g~~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~----~~d~l 226 (430)
..+|+-++++-.+=-. -+.-++--++++.+-++ ..++||++|.||.|+...+ +|++-.| |+-+.+. -+...
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~~L~~Rs~i~~~iR~f-f~~~gF~EV~TPiL~~~~~-~ga~~~p-f~~~~~~~~~~~~~~~ 91 (345)
T 3a5y_A 15 VPRGSHMSETASWQPSASIPNLLKRAAIMAEIRRF-FADRGVLEVETPCMSQATV-TDIHLVP-FETRFVGPGHSQGMNL 91 (345)
T ss_dssp ----------CTTSCSSCHHHHHHHHHHHHHHHHH-HHHTTCEECCCCSEESSCC-CCTTCCC-CEEEECCSTTSCCEEE
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHHCCCEEEECCCCCCCCC-CCCCCCC-EEEEECCCCCCCCCCE
T ss_conf 45766787677768726599999999999999999-9888978987986478898-7645661-6887236666678577
Q ss_pred EECCCCCCHHHHHHHHHCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 23134541145445342059555042088532210788433554343212222102002121278650145789899999
Q gi|254780680|r 227 WLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLSCA 306 (430)
Q Consensus 227 ~Li~TaEvpL~~~~~~~~l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~S~~~~e~~~~~~ 306 (430)
||.-..|..+ ...+. .-+ =|+..++||||.|- .++ .+.-+|+.+|.... ..-++++.+.+
T Consensus 92 yL~~SpQl~l-----q~l~~-~g~-~rVf~I~p~FR~E~----~~~---~H~~EFtmlE~e~a------~~d~~dlm~~~ 151 (345)
T 3a5y_A 92 WLMTSPEYHM-----KRLLV-AGC-GPVFQLCRSFRNEE----MGR---YHNPEFTMLEWYRP------HYDMYRLMNEV 151 (345)
T ss_dssp EECSCSHHHH-----HHHHH-TTC-CSEEEEEEEECCCC----CBT---TBCSEEEEEEEEEE------TCCHHHHHHHH
T ss_pred EECCCHHHHH-----HHHHH-CCC-CCCEEEECCCCCCC----CCC---CCCCCEEEEEEEEC------CCCHHHHHHHH
T ss_conf 7554879999-----99996-799-87279834532699----898---85763455344324------79999999999
Q ss_pred HHHHHHH
Q ss_conf 9999984
Q gi|254780680|r 307 EEILKRL 313 (430)
Q Consensus 307 ~~i~~~L 313 (430)
|++++.+
T Consensus 152 E~li~~v 158 (345)
T 3a5y_A 152 DDLLQQV 158 (345)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 9999999