HHsearch results for GI: 254780680 and protein with PDBid: 3a74_A
>3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A*
Probab=96.73 E-value=0.0013 Score=46.07 Aligned_cols=115 Identities=18% Similarity=0.167 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHCCCHHHHCC
Q ss_conf 99999999999862232032021235620278898655142247677643100023134541145445342059555042
Q gi|254780680|r 173 HLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSLPL 252 (430)
Q Consensus 173 ~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~~~d~l~Li~TaEvpL~~~~~~~~l~~~~LPi 252 (430)
++.-.+++.+-++ +.++||++|.||.|.....-.|...+.. .....+...||....| +|....+ -.-+ =
T Consensus 175 ~~Rs~i~~~iR~f-l~~~gFlEVeTP~L~~~~~~~~a~~f~~---~~~~~~~~~~L~~Spq-----l~~k~lm-v~g~-~ 243 (493)
T 3a74_A 175 ITRSLIIQSMRRY-LDSHGYLEVETPMMHAVAGGAAARPFIT---HHNALDMTLYMRIAIE-----LHLKRLI-VGGL-E 243 (493)
T ss_dssp HHHHHHHHHHHHH-HHHTTCEECCCCSEESSCCSSSSCCCEE---EETTTTEEEEECSCSH-----HHHHHHH-HTTC-C
T ss_pred HHHHHHHHHHHHH-HHHCCCCEECCCCCCEECCCCCCCCCCC---CCCCCCCCCCCCCCCC-----HHHHHHH-HHHH-C
T ss_conf 9999999999999-9865973331776410037866655201---5446886743367821-----5789888-7410-5
Q ss_pred EEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEE-ECCCCCCHHHHHHHHHHH
Q ss_conf 08853221078843355434321222210200212-127865014578989999
Q gi|254780680|r 253 RFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELV-SITREEDSFTEHERMLSC 305 (430)
Q Consensus 253 k~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~-~~~~pe~S~~~~e~~~~~ 305 (430)
||..++||||.|- .++ -|+-+|+-+|+. +|++-++-....|.|+..
T Consensus 244 rvfqI~~~FR~E~----~~~---~h~pEFT~le~e~af~d~~d~m~~~E~l~~~ 290 (493)
T 3a74_A 244 KVYEIGRVFRNEG----IST---RHNPEFTMLELYEAYADFRDIMKLTENLIAH 290 (493)
T ss_dssp EEEEEEEEECCCC----CBT---TBCSEEEEEEEEEETCCHHHHHHHHHHHHHH
T ss_pred CEEEEECEECCCC----CCC---CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 4789700035787----887---8860668778887633798899889999999