HHsearch results for GI: 254780680 and protein with PDBid: 3i7f_A

>3i7f_A Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-binding, aminoacyl-tRNA synthetase, ligase, nucleotide-binding, protein biosynthesis; 2.80A {Entamoeba histolytica}
Probab=96.74  E-value=0.0064  Score=40.82  Aligned_cols=115  Identities=16%  Similarity=0.302  Sum_probs=65.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHCCCHHHH
Q ss_conf             88999999999998622320320212356202788986551422476776431000231345411454453420595550
Q gi|254780680|r  171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSL  250 (430)
Q Consensus       171 ~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~~~d~l~Li~TaEvpL~~~~~~~~l~~~~L  250 (430)
                      .-++--++++..-++. .++||++|-||.|+.... +|.+..  |.-.  ..+.+.||.-..|.     |+...+.. .+
T Consensus       243 i~r~Rs~i~~~iR~ff-~~~gFlEVeTPiL~~~~~-eg~~~~--f~~~--~~~~~~yL~~SPel-----~~k~ll~~-g~  310 (548)
T 3i7f_A          243 IFRIQSACCGLFREFL-TSQKFVEIHTPKLIGCSS-EGGSNI--FEVK--YFDRKAYLAQSPQL-----YKQMAIMG-DF  310 (548)
T ss_dssp             HHHHHHHHHHHHHHHH-HHTTCEECCCCSBC------------------------CCBCSCTHH-----HHHHHHTT-TC
T ss_pred             HHHHHHHHHHHHHHHH-HHCCCEEEECCEECCCCC-CCCCCC--CCCC--CCCHHHHHHHHHHH-----HHHHHHHC-CC
T ss_conf             9999999999999999-977998988872123676-765560--0011--11126676332678-----99999862-66


Q ss_pred             CCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEE-CCC-CCCHHHHHHHHHH
Q ss_conf             42088532210788433554343212222102002121-278-6501457898999
Q gi|254780680|r  251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS-ITR-EEDSFTEHERMLS  304 (430)
Q Consensus       251 Pik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~-~~~-pe~S~~~~e~~~~  304 (430)
                       =|+..+++|||.|-..    |  -....+|+-+|... |.+ -++-....++|+.
T Consensus       311 -~rVfeI~~~FR~E~~~----t--~rHlpEFT~LE~e~a~~~~~~d~m~~~e~l~~  359 (548)
T 3i7f_A          311 -RKVFEVGPVFRAENSN----T--RRHLTEFEGLDIEMEIVENYHECIDVMEKLFT  359 (548)
T ss_dssp             -CEEEEEEEECCCSCCC----S--SSCCSCEEEEEEEEECSSCTHHHHHHHHHHHH
T ss_pred             -CCCCCCCEEEECCCCC----C--CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHH
T ss_conf             -3234434056645455----5--55687515501007789889999999999999