HHsearch results for GI: 254780680 and protein with PDBid: 3i7f_A
>3i7f_A Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-binding, aminoacyl-tRNA synthetase, ligase, nucleotide-binding, protein biosynthesis; 2.80A {Entamoeba histolytica}
Probab=96.74 E-value=0.0064 Score=40.82 Aligned_cols=115 Identities=16% Similarity=0.302 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHCCCHHHH
Q ss_conf 88999999999998622320320212356202788986551422476776431000231345411454453420595550
Q gi|254780680|r 171 LAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGRWLIPTSEVSLTNLYSHEIIESKSL 250 (430)
Q Consensus 171 ~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~~~d~l~Li~TaEvpL~~~~~~~~l~~~~L 250 (430)
.-++--++++..-++. .++||++|-||.|+.... +|.+.. |.-. ..+.+.||.-..|. |+...+.. .+
T Consensus 243 i~r~Rs~i~~~iR~ff-~~~gFlEVeTPiL~~~~~-eg~~~~--f~~~--~~~~~~yL~~SPel-----~~k~ll~~-g~ 310 (548)
T 3i7f_A 243 IFRIQSACCGLFREFL-TSQKFVEIHTPKLIGCSS-EGGSNI--FEVK--YFDRKAYLAQSPQL-----YKQMAIMG-DF 310 (548)
T ss_dssp HHHHHHHHHHHHHHHH-HHTTCEECCCCSBC------------------------CCBCSCTHH-----HHHHHHTT-TC
T ss_pred HHHHHHHHHHHHHHHH-HHCCCEEEECCEECCCCC-CCCCCC--CCCC--CCCHHHHHHHHHHH-----HHHHHHHC-CC
T ss_conf 9999999999999999-977998988872123676-765560--0011--11126676332678-----99999862-66
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEE-CCC-CCCHHHHHHHHHH
Q ss_conf 42088532210788433554343212222102002121-278-6501457898999
Q gi|254780680|r 251 PLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVS-ITR-EEDSFTEHERMLS 304 (430)
Q Consensus 251 Pik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~-~~~-pe~S~~~~e~~~~ 304 (430)
=|+..+++|||.|-.. | -....+|+-+|... |.+ -++-....++|+.
T Consensus 311 -~rVfeI~~~FR~E~~~----t--~rHlpEFT~LE~e~a~~~~~~d~m~~~e~l~~ 359 (548)
T 3i7f_A 311 -RKVFEVGPVFRAENSN----T--RRHLTEFEGLDIEMEIVENYHECIDVMEKLFT 359 (548)
T ss_dssp -CEEEEEEEECCCSCCC----S--SSCCSCEEEEEEEEECSSCTHHHHHHHHHHHH
T ss_pred -CCCCCCCEEEECCCCC----C--CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHH
T ss_conf -3234434056645455----5--55687515501007789889999999999999