HHsearch results for GI: 254780680 and protein with PDBid: 3net_A
>3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP}
Probab=98.92 E-value=4.6e-09 Score=86.50 Aligned_cols=153 Identities=20% Similarity=0.289 Sum_probs=116.2
Q ss_pred CCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHC-------------HHHHHHHHHHH----H
Q ss_conf 753010564889999999999986223203202123562027889865514-------------22476776431----0
Q gi|254780680|r 162 ARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQI-------------PKFADDMFCTT----D 224 (430)
Q Consensus 162 srF~~Lkg~~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~l-------------p~f~~~~y~~~----d 224 (430)
.||+.+-..++++.+.|.+++.+. ..++||.+|.+|.|-+.+++...|.. |.....+|... .
T Consensus 16 ~G~~d~lP~~~~~~~~i~~~~r~~-~~~~Gy~eI~tP~le~~dl~~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~ 94 (465)
T 3net_A 16 SGFPEFLPSEKRLELYLLDTIRRV-YESYGFTPIETPAVERLEVLQAKGNQGDNIIYGLEPILPPNRQAEKDKSGDTGSE 94 (465)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHHHH-HHHTTCEECCCCSEEEHHHHHGGGCC--CBEEEEEEEC----------------C
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHH-HHHCCCEEEECCCCCCHHHHCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCC
T ss_conf 986203986999999999999999-9987997999651173888706577666243322024550124441665677886
Q ss_pred CCEECCCCCCHHHHHHHHHCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 00231345411454453420595550420885322107884335543432122221020021212786501457898999
Q gi|254780680|r 225 GRWLIPTSEVSLTNLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHERMLS 304 (430)
Q Consensus 225 ~l~Li~TaEvpL~~~~~~~~l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvHQF~KVE~~~~~~pe~S~~~~e~~~~ 304 (430)
.++|-|-.-.|++-++... +....+|+|++.++++||.|.... | |+.||+-...-.||.++.|...--+++.
T Consensus 95 ~l~Lrpd~t~~~~r~~~~~-~~~~~~p~r~~~~g~~~R~e~~~~-----g--r~Ref~Q~~~ei~g~~~~~~~~dae~i~ 166 (465)
T 3net_A 95 ARALKFDQTVPLAAYIARH-LNDLTFPFARYQMDVVFRGERAKD-----G--RFRQFRQCDIDVVGREKLSLLYDAQMPA 166 (465)
T ss_dssp CEEECSCSHHHHHHHHHHH-GGGSCSSEEEEECCEEECBC-------------CCEEEEEEEEEECSSCCCHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHH-CCCCCCCEEEEEEEEEEEECCCCC-----C--CCCHHHCCCEEEEECCCCCCHHHHHHHH
T ss_conf 7995378878999999851-101479879999601888237887-----8--5023220675477157764188899998
Q ss_pred HHHHHHHHHCCHHHHCCCC
Q ss_conf 9999999841067530378
Q gi|254780680|r 305 CAEEILKRLDLHYRVVSLC 323 (430)
Q Consensus 305 ~~~~i~~~L~lpyRvv~~~ 323 (430)
.+-++++.+++..-.+.+.
T Consensus 167 ~~~~~~~~~~~~~~~i~i~ 185 (465)
T 3net_A 167 IITEIFEAVNIGDFVIRIN 185 (465)
T ss_dssp HHHHHHHHHTCSCEEEEEE
T ss_pred HHHHHHHHCCCCCHHHCCC
T ss_conf 6887764112466020025