HHsearch results for GI: 254780680 and protein with PDBid: 3od1_A
>3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans}
Probab=97.99 E-value=3.3e-05 Score=57.88 Aligned_cols=140 Identities=16% Similarity=0.225 Sum_probs=103.3
Q ss_pred CCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCHHHHHHHHHHH----HCCEECCCCCCHHHH
Q ss_conf 5301056488999999999998622320320212356202788986551422476776431----000231345411454
Q gi|254780680|r 163 RFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTT----DGRWLIPTSEVSLTN 238 (430)
Q Consensus 163 rF~~Lkg~~A~Le~ALi~y~ld~~~~~~Gy~~v~~P~lv~~~~~~gtG~lp~f~~~~y~~~----d~l~Li~TaEvpL~~ 238 (430)
||--+.++-+++.+.+.+-..+. ...+||.++.||.+-..+++...|. ....++|+.. ..+.|-|=-=+|++-
T Consensus 15 G~~D~~p~~~~~~~~i~~~l~~~-~~~~Gy~~I~tP~~E~~~~~~~~~~--~~~~~~~~f~D~~g~~l~LRpD~T~~iaR 91 (400)
T 3od1_A 15 GMRDTLPEWYKTKKNICDQMTEE-INLWGYDMIETPTLEYYETVGVVSA--ILDQQLFKLLDQQGNTLVLRPDMTAPIAR 91 (400)
T ss_dssp TCCCBCHHHHHHHHHHHHHHHHH-HHHTTCEECBCCSEEETTTHHHHSS--SCGGGSCEEECTTSCEEEECSCSHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHH-HHHCCCEEEECCCEEEHHHHCCCCC--CCCCCEEEEECCCCCEEEECCCCHHHHHH
T ss_conf 87577999999999999999999-9986995767685645155344476--34000599997999989878866599999
Q ss_pred HHHHHCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEE-EEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 45342059555042088532210788433554343212222-1020021212786501457898999999999984106
Q gi|254780680|r 239 LYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQH-QFWKCELVSITREEDSFTEHERMLSCAEEILKRLDLH 316 (430)
Q Consensus 239 ~~~~~~l~~~~LPik~~~~s~cfR~EaGs~GkdtrGl~RvH-QF~KVE~~~~~~pe~S~~~~e~~~~~~~~i~~~L~lp 316 (430)
++....-+ ..+|+|++-.++|||.|.-. +|-+|.+ |+ =||++.. +|...--|++..+.++++.|++.
T Consensus 92 ~~a~~~~~-~~~p~k~~y~g~vfR~~~~~-----~g~~re~~Q~-g~EiiG~----~s~~ad~EvI~l~~~~l~~lg~~ 159 (400)
T 3od1_A 92 LVASSLKD-RAYPLRLAYQSNVYRAQQNE-----GGKPAEFEQL-GVELIGD----GTASADGEVIALMIAALKRAGLS 159 (400)
T ss_dssp HHHHHCSS-SCSCEEEEEEEEEECCCC--------CCCSEEEEE-EEEEESC----CSHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHC-CCCCEEEEEECCEEEECCCC-----CCCCEEEEEC-CEEEEEC----CCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99986510-57872799976788845766-----8961265305-5567524----77287899999999999856997