PSIBLAST alignment of GI: 254780680 and protein with PDB id: 3err
>gi|215261312|pdb|3ERR|A Chain A, Microtubule Binding Domain From Mouse Cytoplasmic Dynein As A Fusion With Seryl-Trna Synthetase Length = 536
>gi|215261313|pdb|3ERR|B Chain B, Microtubule Binding Domain From Mouse Cytoplasmic Dynein As A Fusion With Seryl-Trna Synthetase Length = 536
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 126/358 (35%), Positives = 191/358 (53%), Gaps = 8/358 (2%)
Query: 71 DALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGK 130
+ L+ +L LE + + L+ L+ +P P P+G + R VG
Sbjct: 176 ADMLKRVEPLRNELQKLEDDAKDNQQKLEALLLQVPLPPWPGAPVGGEEANREIKR-VGG 234
Query: 131 KPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEH 190
P +H + E G + R +++SG+R L G LA E AL +F +D
Sbjct: 235 PPEFSFPPLDHVALMEKNGWWEP-RISQVSGSRSYALKGDLALYELALLRFAMDFMA-RR 292
Query: 191 GYTEVSAPLLVRDEAMYGTGQIPKFADDMFCT-TDGRWLIPTSEVSLTNLYSHEIIESKS 249
G+ ++ P R++A GTG P + D ++ +L T+EV L L+S EI+ ++
Sbjct: 293 GFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAETDLYLTGTAEVVLNALHSGEILPYEA 352
Query: 250 LPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAE 307
LPLR+ AP+FRSEAGS G+D RG++R HQF K E +T E S + +L AE
Sbjct: 353 LPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAE 412
Query: 308 EILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSR 367
EIL+ L+L YR+V + TGD+G + D+EV+L + YRE SCS ++Q+RR N R
Sbjct: 413 EILRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLR 472
Query: 368 YRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMNNLAVIKK 425
YRDP + +++ +TLN + +A R L +LEN+ DG V +P L PYM V++
Sbjct: 473 YRDPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYM-GKEVLEP 528