RPSBLAST alignment for GI: 254780680 and conserved domain: TIGR00414
>gnl|CDD|161867 TIGR00414, serS, seryl-tRNA synthetase. This model represents the seryl-tRNA synthetase found in most organisms. This protein is a class II tRNA synthetase, and is recognized by the pfam model tRNA-synt_2b. The seryl-tRNA synthetases of two archaeal species, Methanococcus jannaschii and Methanobacterium thermoautotrophicum, differ considerably and are included in a different model. Length = 418
Score = 484 bits (1248), Expect = e-137
Identities = 200/420 (47%), Positives = 284/420 (67%), Gaps = 5/420 (1%)
Query: 1 MLDIQWIRQNPEHLDIALKKRHL--EPQSEYILSLDEKNRILIKKIEDIRARRNSNSAQI 58
MLD + +R NP+ + +LK R L + E +++LD++ + L+ +IE+++A+RN S QI
Sbjct: 1 MLDRKLLRNNPDLVKESLKARGLSVDIDLEKLIALDDERKKLLSEIEELQAKRNELSKQI 60
Query: 59 GQAIAEGNLSLVDALKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTS 118
G+A + ++ +K E LKE+L L + + L+ + IPN+P E VP+G
Sbjct: 61 GKAKGQKK-DKIEEIKKELKELKEELTELSAALKALEAELQDKLLSIPNIPHESVPVGKD 119
Query: 119 ANENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERAL 178
+N+ ++ G P + H+E+GE LG +DFDRA K++G+RF L A LERAL
Sbjct: 120 EEDNLEVKRWGTPPVFDFKPKPHWELGEKLGGLDFDRAVKVTGSRFYYLKNDGAKLERAL 179
Query: 179 GQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMFCTTDGR-WLIPTSEVSLT 237
FM+DL ++GY E+ P LV +E++ GTGQ+PKF +D+F D +LIPT+EV LT
Sbjct: 180 INFMLDLL-EKNGYQEIYPPYLVNEESLDGTGQLPKFEEDIFKLEDTDLYLIPTAEVPLT 238
Query: 238 NLYSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFT 297
NL+ +EI+E + LP+++T +P FRSEAGS G+DT+G++R HQF K ELV + E+S
Sbjct: 239 NLHRNEILEEEELPIKYTAHSPCFRSEAGSYGKDTKGLIRVHQFNKVELVKFCKPEESAE 298
Query: 298 EHERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCG 357
E E M S AE+IL+ L+L YRVV+LC+GDLGFSA K YDLEVW+ GQN YREISSCS C
Sbjct: 299 ELEEMTSDAEQILQELELPYRVVNLCSGDLGFSAAKKYDLEVWMPGQNTYREISSCSNCT 358
Query: 358 NFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417
+FQ+RR+N RY+D N K+ HTLNG+ +A+GR ++AILENY DGSV IP VLR Y+
Sbjct: 359 DFQARRLNIRYKDKNKGKNKYVHTLNGTALAIGRTIVAILENYQTEDGSVEIPEVLRKYL 418