RPSBLAST alignment for GI: 254780680 and conserved domain: cd00770

>gnl|CDD|29815 cd00770, SerRS_core, Seryl-tRNA synthetase (SerRS) class II core catalytic domain. SerRS is responsible for the attachment of serine to the 3' OH group of ribose of the appropriate tRNA. This domain It is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain. SerRS synthetase is a homodimer.. Length = 297

 Score =  419 bits (1080), Expect = e-118
 Identities = 152/298 (51%), Positives = 200/298 (67%), Gaps = 2/298 (0%)

Query: 121 ENILIRSVGKKPSAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQ 180
           +N+ IR  G+        ++H E+GE L ++DF+R  K+SG+RF  L G  A LERAL  
Sbjct: 1   DNVEIRRWGEPRVFDFKPKDHVELGEKLDILDFERGAKVSGSRFYYLKGDGALLERALIN 60

Query: 181 FMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTNL 239
           F +D  T + G+T V  P LVR E M GTGQ+PKF + ++    +  +LI T+EV L  L
Sbjct: 61  FALDFLT-KRGFTPVIPPFLVRKEVMEGTGQLPKFDEQLYKVEGEDLYLIATAEVPLAAL 119

Query: 240 YSHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEH 299
           +  EI+E + LPL++   +P FR EAGSAGRDTRG+ R HQF K E    T+ E+S+ E 
Sbjct: 120 HRDEILEEEELPLKYAGYSPCFRKEAGSAGRDTRGLFRVHQFEKVEQFVFTKPEESWEEL 179

Query: 300 ERMLSCAEEILKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNF 359
           E ++S AEEIL+ L L YRVV++CTGDLGF+A K YD+E W+ GQ  YREISSCS C +F
Sbjct: 180 EELISNAEEILQELGLPYRVVNICTGDLGFAAAKKYDIEAWMPGQGKYREISSCSNCTDF 239

Query: 360 QSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYM 417
           Q+RR+N RYRD      ++ HTLNG+ +A  R ++AILENY   DGSV IP VLRPYM
Sbjct: 240 QARRLNIRYRDKKDGKKQYVHTLNGTALATPRTIVAILENYQTEDGSVVIPEVLRPYM 297