RPSBLAST alignment of GI: 254780680 and protein with PDBid: 2cja
>2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A Length = 522
Score = 242 bits (618), Expect = 2e-64
Identities = 57/433 (13%), Positives = 116/433 (26%), Gaps = 73/433 (16%)
Query: 40 LIKKIEDIRARRNSNSAQIGQAIAEGNLSLVDALKNETSTLKEQLPILEK--EEHEVCSS 97
+ K I R + I + A+ L ++ ++ E LE E E+
Sbjct: 104 ALGKKYKIGIRGIEVESFIIKVPADHELRMLKVPYIKSMENIEGGIQLELEVGEAEMK-- 161
Query: 98 LKKLISCIPNVPLEEVPIGTSANENILIRSVGKKPSAIH--LSREHFEIGEALGLMD-FD 154
VP + + E + + + + EH + M
Sbjct: 162 --------NRVPDRILTLLEEKIEAAQYGAKAEHWNLLWQREPMEHPFKEDPTQAMMKEG 213
Query: 155 RATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGYTEVSAPLLVRDEAMYGTGQIPK 214
+ S + A + R + +++ GY E+ P LV E +G
Sbjct: 214 WLKRGSSRGQWIHGPQSARIFRTFEKIVLEELLEPLGYREMIFPKLVTWEVWMKSGHAKG 273
Query: 215 FADDMFCTTDGR----------------------------------WLIPTSEVSLTNLY 240
+++ + +
Sbjct: 274 VYPEIYYVCPPQTRDPDYWEEVADYYKVTHEVPTKLIKEKIAEPIGGMCYAQCPPFWMYV 333
Query: 241 SHEIIESKSLPLRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITREEDSFTEHE 300
+ E + ++ +P++ + + G+ R +F + E+V I +E+ E
Sbjct: 334 AGETLPNEEIPVKVFDRSGTSHRYESGG---IHGIERVDEFHRIEIVWIGTKEEVLKCAE 390
Query: 301 RMLSCAEEILK-RLDLHYRVVSL---------CTGDLGFSACKTYDLEVWLAGQNLYREI 350
+ I LD+ +R + G + T D E L + E
Sbjct: 391 ELHDRYMHIFNDILDIEWRKARVTPWFMAQEGLLGLAEENTVGTTDYEACLPYRGPDGEW 450
Query: 351 SSCST---CGNFQSRRMNSRYRDPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSV 407
G+ + N + + + SGV + R L
Sbjct: 451 LEFQNVSINGDKYPKGFNVKLQSG-----DELWS-GCSGVGLERWAAVFLAQKGLDPA-- 502
Query: 408 TIPTVLRPYMNNL 420
P R + +
Sbjct: 503 NWPEEFRNRVGEM 515