RPSBLAST alignment of GI: 254780680 and protein with PDBid: 3err

>3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} Length = 536

 Score =  375 bits (963), Expect = e-104
 Identities = 126/349 (36%), Positives = 189/349 (54%), Gaps = 7/349 (2%)

Query: 73  LKNETSTLKEQLPILEKEEHEVCSSLKKLISCIPNVPLEEVPIGTSANENILIRSVGKKP 132
           +      L+ +L  LE +  +    L+ L+  +P  P    P+G     N  I+ VG  P
Sbjct: 178 MLKRVEPLRNELQKLEDDAKDNQQKLEALLLQVPLPPWPGAPVGGEEA-NREIKRVGGPP 236

Query: 133 SAIHLSREHFEIGEALGLMDFDRATKLSGARFSVLTGHLAHLERALGQFMIDLHTSEHGY 192
                  +H  + E  G  +  R +++SG+R   L G LA  E AL +F +D      G+
Sbjct: 237 EFSFPPLDHVALMEKNGWWEP-RISQVSGSRSYALKGDLALYELALLRFAMDFMA-RRGF 294

Query: 193 TEVSAPLLVRDEAMYGTGQIPKFADDMF-CTTDGRWLIPTSEVSLTNLYSHEIIESKSLP 251
             ++ P   R++A  GTG  P + D ++       +L  T+EV L  L+S EI+  ++LP
Sbjct: 295 LPMTLPSYAREKAFLGTGHFPAYRDQVWAIAETDLYLTGTAEVVLNALHSGEILPYEALP 354

Query: 252 LRFTTLAPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITRE--EDSFTEHERMLSCAEEI 309
           LR+   AP+FRSEAGS G+D RG++R HQF K E   +T    E S    + +L  AEEI
Sbjct: 355 LRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEI 414

Query: 310 LKRLDLHYRVVSLCTGDLGFSACKTYDLEVWLAGQNLYREISSCSTCGNFQSRRMNSRYR 369
           L+ L+L YR+V + TGD+G    +  D+EV+L  +  YRE  SCS   ++Q+RR N RYR
Sbjct: 415 LRLLELPYRLVEVATGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLRYR 474

Query: 370 DPNSKSLKFTHTLNGSGVAVGRCLIAILENYLNADGSVTIPTVLRPYMN 418
           DP  + +++ +TLN + +A  R L  +LEN+   DG V +P  L PYM 
Sbjct: 475 DPEGR-VRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYMG 522