HHsearch results for GI: 254780683 and protein with PDBid: 3nyy_A
>3nyy_A Putative glycyl-glycine endopeptidase LYTM; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE 2PE SO4; 1.60A {Ruminococcus gnavus}
Probab=99.88 E-value=4.2e-23 Score=141.37 Aligned_cols=81 Identities=25% Similarity=0.334 Sum_probs=71.5
Q ss_pred CEEEECCCCCCCCEEEEEECCCCEEEEEECCCCC-CCCCCEEEECCEEEEEECCCCCC----C---CCEEEEEEEECC--
Q ss_conf 5999606986551199999899889984115634-41120022031248998057888----8---856999997868--
Q gi|254780683|r 1 MVIYVGNDLVELGNTILIRHDDSIVTVYSHIDTP-YVQKGQKVSRGHTIGLSGKSGNA----Q---HPQVHFELRKNA-- 70 (84)
Q Consensus 1 VVv~~g~~~~~~G~~V~I~h~~g~~t~Y~hl~~i-~v~~G~~V~~G~~IG~vg~tg~~----~---g~hLhfei~~~g-- 70 (84)
+|+++++. .++|++|+|+|++|+.++|+||+++ .|++||.|++||+||++|+||.+ + +|||||||+.++
T Consensus 149 ~V~~~g~~-~~~G~~V~I~h~~g~~t~Y~HL~~~~~V~~G~~V~~Gq~IG~vG~TG~~~~~stg~~~pHLHfev~~~~~~ 227 (252)
T 3nyy_A 149 VVTEKGWL-EKGGWRIGITAPTGAYFYYAHLDSYAELEKGDPVKAGDLLGYMGDSGYGEEGTTGEFPVHLHLGIYLKEGT 227 (252)
T ss_dssp EEEEEEEE-TTTEEEEEEECTTSCEEEEEEESEECSCCTTCEECTTCEEEECBCCCSSSTTCCCSSCCEEEEEEEEEETT
T ss_pred EEEEEEEC-CCCCEEEEEEECCCCEEEEEECCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCC
T ss_conf 99985574-99980999996898889851356555568899998689999825777889887898898789999989987
Q ss_pred --EECCHHHHHHCC
Q ss_conf --980526987503
Q gi|254780683|r 71 --IAMDPIKFLEEK 82 (84)
Q Consensus 71 --~~vdP~~~l~~k 82 (84)
.++||++||+..
T Consensus 228 ~~~~vdP~~~Lk~~ 241 (252)
T 3nyy_A 228 EEISVNPYPVLRYA 241 (252)
T ss_dssp EEEEECCHHHHHHT
T ss_pred CCEEECCHHHHHHH
T ss_conf 75470879999999