HHSEARCH alignment of GI: 254780683 and SCOP domain: d1qwya_

Alignment
>d1qwya_ b.84.3.2 (A:) Peptidoglycan hydrolase LytM {Staphylococcus aureus [TaxId: 1280]}
Probab=99.92  E-value=9.5e-26  Score=154.06  Aligned_cols=80  Identities=33%  Similarity=0.510  Sum_probs=74.2

Q ss_pred             CEEEECCCCCCCCEEEEEECCCC-EEEEEECCCCCCCCCCEEEECCEEEEEECCCCCCCCCEEEEEEEECC----EECCH
Q ss_conf             59996069865511999998998-89984115634411200220312489980578888856999997868----98052
Q gi|254780683|r    1 MVIYVGNDLVELGNTILIRHDDS-IVTVYSHIDTPYVQKGQKVSRGHTIGLSGKSGNAQHPQVHFELRKNA----IAMDP   75 (84)
Q Consensus         1 VVv~~g~~~~~~G~~V~I~h~~g-~~t~Y~hl~~i~v~~G~~V~~G~~IG~vg~tg~~~g~hLhfei~~~g----~~vdP   75 (84)
                      +|+++++...++|++|+|+|+++ +.++|+||+++.|++||.|++||+||++|+||++++||||||||+++    ++|||
T Consensus       186 ~V~~ag~~~~g~G~~V~I~h~~g~~~t~Y~hl~~~~V~~Gq~V~~Gq~IG~vGsTG~stgpHLHFEi~~~g~~~~~~VDP  265 (270)
T d1qwya_         186 TVVQAGWSNYGGGNQVTIKEANSNNYQWYMHNNRLTVSAGDKVKAGDQIAYSGSTGNSTAPHVHFQRMSGGIGNQYAVDP  265 (270)
T ss_dssp             EEEEEEEETTTTEEEEEEEETTSSEEEEEEEESEECCCTTCEECTTCEEEECCCCSSCSSSEEEEEEEESEESGGGEECC
T ss_pred             EEEEEEECCCCCCEEEEEEECCCCEEEEEEECCEEECCCCCEECCCCEEEEECCCCCCCCCEEEEEEEECCCCCCEEECC
T ss_conf             99998975679986999970898879999837721138899998689999967889989977999999899179768394


Q ss_pred             HHHHH
Q ss_conf             69875
Q gi|254780683|r   76 IKFLE   80 (84)
Q Consensus        76 ~~~l~   80 (84)
                      ++||+
T Consensus       266 ~~~Lk  270 (270)
T d1qwya_         266 TSYLQ  270 (270)
T ss_dssp             HHHHC
T ss_pred             HHHHC
T ss_conf             79739


SCOP domain information

class: All beta proteins
fold: Barrel-sandwich hybrid
superfamily: Duplicated hybrid motif
family: Peptidoglycan hydrolase LytM
domain: Peptidoglycan hydrolase LytM
species: Staphylococcus aureus [TaxId: 1280]