254780684
flagellum-specific ATP synthase
GeneID in NCBI database: | 8209688 | Locus tag: | CLIBASIA_02855 |
Protein GI in NCBI database: | 254780684 | Protein Accession: | YP_003065097.1 |
Gene range: | +(582824, 584140) | Protein Length: | 438aa |
Gene description: | flagellum-specific ATP synthase | ||
COG prediction: | none | ||
KEGG prediction: | fliI; flagellum-specific ATP synthase (EC:3.6.3.14); K02412 flagellum-specific ATP synthase [EC:3.6.3.14] | ||
SEED prediction: | Flagellum-specific ATP synthase FliI | ||
Pathway involved in KEGG: | Flagellar assembly [PATH:las02040] | ||
Subsystem involved in SEED: | - none - | ||
sequence | sequence profile |
Prediction of Local Sequence Properties
Source | Summary | Result |
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Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
Identity | Alignment graph | Length | Definition | E-value | |
Target | 438 | flagellum-specific ATP synthase [Candidatus Liberibacte | |||
254780615 | 478 | F0F1 ATP synthase subunit beta [Candidatus Liberib | 9e-33 | ||
254780617 | 509 | F0F1 ATP synthase subunit alpha [Candidatus Liberi | 5e-26 | ||
254780810 | 423 | transcription termination factor Rho [Candidatus L | 3e-13 |
>gi|254780615|ref|YP_003065028.1| F0F1 ATP synthase subunit beta [Candidatus Liberibacter asiaticus str. psy62] Length = 478 | Back alignment |
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Score = 132 bits (333), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 96/334 (28%), Positives = 166/334 (49%), Gaps = 25/334 (7%) Query: 81 ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 +S GD V G + + GR++N +G+P+D ++ + + + P+ Q Sbjct: 69 LSRGDCVIDTGTQITVPVGEATLGRIMNVIGEPVDDQGAIISSE--KRAIHQPSPSYTEQ 126 Query: 140 RVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISL 194 + TGI+VID+ +P G +IG+F G+G+GK+ L+ + A++ V Sbjct: 127 STDASILTTGIKVIDLISPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG- 185 Query: 195 VGERGREVREFIEDYLGDNLK-------------KSVVVVATSDESPILRKMAPLTAVTI 241 VGER RE + + + + K ++ +E P R LT +T+ Sbjct: 186 VGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVALTGLTV 245 Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 AE+F +G +VL +D+I RF + EI+ G +P A GY +++ E+ L ERI + Sbjct: 246 AEHFRDQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERI--TT 303 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 KG+IT+V ++ V D+ DP + + LD VL+R ++E+G YP +DPL S S + Sbjct: 304 TLKGSITSVQAIYVPADDLTDPAPATSFTHLDATTVLSRQISEKGIYPAIDPLDSNSSML 363 Query: 362 DKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 + E V+ + ++ R++ +DI I G Sbjct: 364 EIDIVGQEHYDVARRVQEILQRYKSLQDIIAILG 397 |
>gi|254780617|ref|YP_003065030.1| F0F1 ATP synthase subunit alpha [Candidatus Liberibacter asiaticus str. psy62] Length = 509 | Back alignment |
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Score = 110 bits (275), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 97/345 (28%), Positives = 158/345 (45%), Gaps = 25/345 (7%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDS 118 G + + +D V + +G +EIS GD+V GR P GRV++ALG PIDG Sbjct: 61 GMALNLEVDNVGVVILGSYKEISEGDIVKRTGRIVDVPVGLELLGRVVDALGNPIDG--- 117 Query: 119 LGKGDLSMEIMS----KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 KG + E S P + RQ V + TGI+ ID P+ GQR + GK Sbjct: 118 --KGPIKCEQRSCTEADAPGIIQRQSVCEPLSTGIKAIDSLIPIGRGQRELIIGDRKTGK 175 Query: 175 STLL--SMFARSDCFDK--------VIISLVGERGREVREFIEDYLGDN--LKKSVVVVA 222 ++++ + + DK I +G++ V F++ L D L S+VVVA Sbjct: 176 TSIILDTFLNQKSSHDKGSEKDKVYCIYVAIGQKRSSVARFVK-ALEDRGALSYSIVVVA 234 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 ++ + ++ +AP + EYF G + L+ D + + A + R+++ P Y Sbjct: 235 SASDPAPMQLLAPFAGCAMGEYFRDNGYHALIAYDDLQKHAVAYRQLSLLLRRPPGREAY 294 Query: 283 PTSVFSELPRLLERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 P VF RLLER G++TA+ + ++ + I +V SI DG I L Sbjct: 295 PGDVFYLHSRLLERAAKMSDALGAGSLTALPVIETQVNDVSAYIPTNVISITDGQIFLET 354 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 L +G P ++ SVSR+ A K++ ++ + ++ E Sbjct: 355 ELFYQGIRPAINIGLSVSRVGSAAQVKAMKQVSGAVKGELAQYRE 399 |
>gi|254780810|ref|YP_003065223.1| transcription termination factor Rho [Candidatus Liberibacter asiaticus str. psy62] Length = 423 | Back alignment |
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Score = 67.8 bits (164), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 121/259 (46%), Gaps = 30/259 (11%) Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVR 203 RVID+ P+ GQR + A GK+ LL A S +C+ +I+ L+ ER EV Sbjct: 163 RVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECY--LIVLLIDERPEEVT 220 Query: 204 EFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263 + G+ V+ +T DES + A+ G +V+++LDSITR Sbjct: 221 DMQRSVQGE------VISSTFDESAARHVQVAEMVIAKAKCLVEYGLDVVILLDSITRLC 274 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD-GDNHND 322 + + +SG++ + G + + P+ + KE G++T + + LVD G ++ Sbjct: 275 RAYNVLMPSSGKI-LTGGVDANAL-QRPKRFFGAARNIKEGGSLTIIGTALVDTGSRMDE 332 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE-------KKLVSS 375 I + + + IVL R +A++ +P +D + S +R D + +++VSS Sbjct: 333 VIFEEFKGTGNSEIVLERKIADKRIFPAMDIIKSGTRKEDLLVERQDLQKVFMLRRIVSS 392 Query: 376 LT------HLIHRFEETRD 388 + LI + ++T+D Sbjct: 393 MNSSDAIEFLIDKLKQTKD 411 |
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
Identity | Alignment graph | Length | Definition | Round | E-value |
Target | 438 | flagellum-specific ATP synthase [Candidatus Liberibacte | |||
315121851 | 449 | flagellum-specific ATP synthase [Candidatus Liberibacte | 1 | 0.0 | |
222084860 | 462 | H(+)-transporting ATP synthase [Agrobacterium radiobact | 1 | 1e-166 | |
227820853 | 466 | flagellum-specific ATP synthase [Sinorhizobium fredii N | 1 | 1e-165 | |
15887903 | 473 | flagellum-specific ATP synthase [Agrobacterium tumefaci | 1 | 1e-164 | |
325291944 | 468 | flagellum-specific ATP synthase [Agrobacterium sp. H13- | 1 | 1e-164 | |
209547923 | 465 | flagellum-specific ATP synthase [Rhizobium leguminosaru | 1 | 1e-163 | |
15964410 | 467 | flagellum-specific ATP synthase [Sinorhizobium meliloti | 1 | 1e-162 | |
2916791 | 467 | flagellar export apparatus protein [Sinorhizobium melil | 1 | 1e-162 | |
327193032 | 464 | H(+)-transporting ATP synthase, flagellum-specific prot | 1 | 1e-161 | |
190890358 | 464 | H(+)-transporting ATP synthase, flagellum-specific prot | 1 | 1e-161 |
>gi|315121851|ref|YP_004062340.1| flagellum-specific ATP synthase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 449 | Back alignment and organism information |
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Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/438 (84%), Positives = 400/438 (91%) Query: 1 MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60 MQ L LAQLAE+YSK++VVQGGYI+SI VYYTVT LS+YVCLGDFVVH+GK SDNLG Sbjct: 1 MQNKLARLAQLAENYSKSIVVQGGYINSIMPVYYTVTGLSKYVCLGDFVVHRGKYSDNLG 60 Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120 QVIRI+ D++Y+CPVGI + I+LGDLVF G FRISPS CWCGRV+NALGKPIDGD SL Sbjct: 61 QVIRIDHDVLYVCPVGIDKTITLGDLVFRQGPFRISPSECWCGRVLNALGKPIDGDFSLK 120 Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180 G SM+I+ K+P MNRQRVEKGFKTGIRVIDIFTPLC+GQRIG+FAGSGIGKSTLLSM Sbjct: 121 TGHFSMDIIGKIPSVMNRQRVEKGFKTGIRVIDIFTPLCYGQRIGIFAGSGIGKSTLLSM 180 Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240 FA+SDCFDKV+ISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA T Sbjct: 181 FAKSDCFDKVVISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAFT 240 Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 IAEYF SKGDNVLLILDSITRFAH+IREI+ NSGELPV RGYP SVFSELPRLLER GP Sbjct: 241 IAEYFCSKGDNVLLILDSITRFAHAIREISMNSGELPVTRGYPASVFSELPRLLERAGPR 300 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 EKEKG+ITA+ISVLVDGDNHNDPIADSVRSILDGH+VL RSLAEEGRYPPVDPLASVSRL Sbjct: 301 EKEKGSITAIISVLVDGDNHNDPIADSVRSILDGHVVLKRSLAEEGRYPPVDPLASVSRL 360 Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 A KAWS+DE+KLV+SL +LIH+FEETRDIRLIGGYRPGVD+ LDKAV QVPIIYDFLKQS Sbjct: 361 AYKAWSSDEEKLVASLKNLIHQFEETRDIRLIGGYRPGVDINLDKAVRQVPIIYDFLKQS 420 Query: 421 PSDLSSEDVFQEITKKLQ 438 PSDL +DVF EITKKLQ Sbjct: 421 PSDLLLKDVFLEITKKLQ 438 |
Species: Candidatus Liberibacter solanacearum Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|222084860|ref|YP_002543389.1| H(+)-transporting ATP synthase [Agrobacterium radiobacter K84] Length = 462 | Back alignment and organism information |
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>gi|227820853|ref|YP_002824823.1| flagellum-specific ATP synthase [Sinorhizobium fredii NGR234] Length = 466 | Back alignment and organism information |
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>gi|15887903|ref|NP_353584.1| flagellum-specific ATP synthase [Agrobacterium tumefaciens str. C58] Length = 473 | Back alignment and organism information |
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>gi|325291944|ref|YP_004277808.1| flagellum-specific ATP synthase [Agrobacterium sp. H13-3] Length = 468 | Back alignment and organism information |
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>gi|209547923|ref|YP_002279840.1| flagellum-specific ATP synthase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 465 | Back alignment and organism information |
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>gi|15964410|ref|NP_384763.1| flagellum-specific ATP synthase [Sinorhizobium meliloti 1021] Length = 467 | Back alignment and organism information |
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>gi|2916791|emb|CAA11957.1| flagellar export apparatus protein [Sinorhizobium meliloti] Length = 467 | Back alignment and organism information |
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>gi|327193032|gb|EGE59944.1| H(+)-transporting ATP synthase, flagellum-specific protein [Rhizobium etli CNPAF512] Length = 464 | Back alignment and organism information |
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>gi|190890358|ref|YP_001976900.1| H(+)-transporting ATP synthase, flagellum-specific protein [Rhizobium etli CIAT 652] Length = 464 | Back alignment and organism information |
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Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLASTagainst CDD database part II
Identity | Alignment graph | Length | Definition | E-value |
Target | 438 | flagellum-specific ATP synthase [Candidatus Liberibacte | ||
PRK06002 | 450 | PRK06002, fliI, flagellum-specific ATP synthase; Valida | 0.0 | |
TIGR03498 | 418 | TIGR03498, FliI_clade3, flagellar protein export ATPase | 1e-164 | |
TIGR03496 | 411 | TIGR03496, FliI_clade1, flagellar protein export ATPase | 1e-149 | |
PRK08472 | 434 | PRK08472, fliI, flagellum-specific ATP synthase; Valida | 2e-94 | |
PRK05922 | 434 | PRK05922, PRK05922, type III secretion system ATPase; V | 1e-57 | |
COG1157 | 441 | COG1157, FliI, Flagellar biosynthesis/type III secretor | 1e-136 | |
PRK08927 | 442 | PRK08927, fliI, flagellum-specific ATP synthase; Valida | 1e-113 | |
cd01136 | 326 | cd01136, ATPase_flagellum-secretory_path_III, Flagellum | 1e-105 | |
PRK06936 | 439 | PRK06936, PRK06936, type III secretion system ATPase; P | 5e-88 | |
PRK08972 | 444 | PRK08972, fliI, flagellum-specific ATP synthase; Valida | 3e-82 | |
PRK06315 | 442 | PRK06315, PRK06315, type III secretion system ATPase; P | 6e-76 | |
PRK07960 | 455 | PRK07960, fliI, flagellum-specific ATP synthase; Valida | 3e-75 | |
PRK08149 | 428 | PRK08149, PRK08149, ATP synthase SpaL; Validated | 6e-74 | |
COG1155 | 588 | COG1155, NtpA, Archaeal/vacuolar-type H+-ATPase subunit | 8e-27 | |
PRK04192 | 586 | PRK04192, PRK04192, V-type ATP synthase subunit A; Prov | 4e-19 | |
TIGR02546 | 422 | TIGR02546, III_secr_ATP, type III secretion apparatus H | 1e-107 | |
TIGR01026 | 440 | TIGR01026, fliI_yscN, ATPase FliI/YscN family | 1e-103 | |
TIGR03497 | 413 | TIGR03497, FliI_clade2, flagellar protein export ATPase | 1e-100 | |
PRK07721 | 438 | PRK07721, fliI, flagellum-specific ATP synthase; Valida | 6e-91 | |
PRK06820 | 440 | PRK06820, PRK06820, type III secretion system ATPase; V | 8e-90 | |
PRK09099 | 441 | PRK09099, PRK09099, type III secretion system ATPase; P | 5e-85 | |
PRK05688 | 451 | PRK05688, fliI, flagellum-specific ATP synthase; Valida | 6e-85 | |
PRK07196 | 434 | PRK07196, fliI, flagellum-specific ATP synthase; Valida | 8e-82 | |
PRK07594 | 433 | PRK07594, PRK07594, type III secretion system ATPase Ss | 4e-79 | |
PRK06793 | 432 | PRK06793, fliI, flagellum-specific ATP synthase; Valida | 3e-60 | |
pfam00006 | 213 | pfam00006, ATP-synt_ab, ATP synthase alpha/beta family, | 1e-79 | |
cd01134 | 369 | cd01134, V_A-ATPase_A, V/A-type ATP synthase catalytic | 2e-26 | |
KOG1352 | 618 | KOG1352, KOG1352, KOG1352, Vacuolar H+-ATPase V1 sector | 2e-21 | |
TIGR01042 | 591 | TIGR01042, V-ATPase_V1_A, V-type (H+)-ATPase V1, A subu | 3e-19 | |
PRK07165 | 507 | PRK07165, PRK07165, F0F1 ATP synthase subunit alpha; Va | 1e-17 | |
cd01120 | 165 | cd01120, RecA-like_NTPases, RecA-like NTPases | 1e-13 | |
PRK12608 | 380 | PRK12608, PRK12608, transcription termination factor Rh | 2e-12 | |
TIGR00767 | 415 | TIGR00767, rho, transcription termination factor Rho | 8e-10 | |
PRK09376 | 416 | PRK09376, rho, transcription termination factor Rho; Pr | 1e-08 | |
smart00382 | 148 | smart00382, AAA, ATPases associated with a variety of c | 5e-04 | |
COG0055 | 468 | COG0055, AtpD, F0F1-type ATP synthase, beta subunit [En | 3e-44 | |
PRK12597 | 461 | PRK12597, PRK12597, F0F1 ATP synthase subunit beta; Pro | 1e-43 | |
TIGR01039 | 461 | TIGR01039, atpD, ATP synthase, F1 beta subunit | 3e-41 | |
KOG1350 | 521 | KOG1350, KOG1350, KOG1350, F0F1-type ATP synthase, beta | 3e-37 | |
TIGR01041 | 458 | TIGR01041, ATP_syn_B_arch, ATP synthase archaeal, B sub | 5e-37 | |
TIGR03305 | 449 | TIGR03305, alt_F1F0_F1_bet, alternate F1F0 ATPase, F1 s | 1e-36 | |
PRK13343 | 502 | PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Pr | 2e-32 | |
TIGR00962 | 501 | TIGR00962, atpA, proton translocating ATP synthase, F1 | 3e-29 | |
TIGR03324 | 497 | TIGR03324, alt_F1F0_F1_al, alternate F1F0 ATPase, F1 su | 8e-27 | |
KOG1351 | 489 | KOG1351, KOG1351, KOG1351, Vacuolar H+-ATPase V1 sector | 1e-25 | |
TIGR01040 | 466 | TIGR01040, V-ATPase_V1_B, V-type (H+)-ATPase V1, B subu | 1e-23 | |
TIGR01043 | 578 | TIGR01043, ATP_syn_A_arch, ATP synthase archaeal, A sub | 1e-20 | |
PRK09281 | 502 | PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Va | 1e-19 | |
PTZ00185 | 574 | PTZ00185, PTZ00185, ATPase alpha subunit; Provisional | 2e-19 | |
cd01133 | 274 | cd01133, F1-ATPase_beta, F1 ATP synthase beta subunit, | 6e-44 | |
cd01135 | 276 | cd01135, V_A-ATPase_B, V/A-type ATP synthase (non-catal | 1e-39 | |
PRK09280 | 463 | PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Val | 2e-39 | |
CHL00060 | 494 | CHL00060, atpB, ATP synthase CF1 beta subunit | 9e-30 | |
cd01132 | 274 | cd01132, F1_ATPase_alpha, F1 ATP synthase alpha, centra | 4e-27 | |
COG1156 | 463 | COG1156, NtpB, Archaeal/vacuolar-type H+-ATPase subunit | 3e-42 | |
COG0056 | 504 | COG0056, AtpA, F0F1-type ATP synthase, alpha subunit [E | 2e-37 | |
PRK04196 | 460 | PRK04196, PRK04196, V-type ATP synthase subunit B; Prov | 1e-35 | |
CHL00059 | 485 | CHL00059, atpA, ATP synthase CF1 alpha subunit | 8e-20 | |
PRK02118 | 436 | PRK02118, PRK02118, V-type ATP synthase subunit B; Prov | 1e-29 | |
PRK14698 | 1017 | PRK14698, PRK14698, V-type ATP synthase subunit A; Prov | 2e-16 | |
cd01128 | 249 | cd01128, rho_factor, Transcription termination factor r | 1e-14 | |
COG1158 | 422 | COG1158, Rho, Transcription termination factor [Transcr | 2e-13 | |
KOG1353 | 340 | KOG1353, KOG1353, KOG1353, F0F1-type ATP synthase, alph | 2e-05 |
>gnl|CDD|168339 PRK06002, fliI, flagellum-specific ATP synthase; Validated | Back alignment and domain information |
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>gnl|CDD|163293 TIGR03498, FliI_clade3, flagellar protein export ATPase FliI | Back alignment and domain information |
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>gnl|CDD|163292 TIGR03496, FliI_clade1, flagellar protein export ATPase FliI | Back alignment and domain information |
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>gnl|CDD|181439 PRK08472, fliI, flagellum-specific ATP synthase; Validated | Back alignment and domain information |
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>gnl|CDD|102061 PRK05922, PRK05922, type III secretion system ATPase; Validated | Back alignment and domain information |
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>gnl|CDD|31351 COG1157, FliI, Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
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>gnl|CDD|181583 PRK08927, fliI, flagellum-specific ATP synthase; Validated | Back alignment and domain information |
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>gnl|CDD|30002 cd01136, ATPase_flagellum-secretory_path_III, Flagellum-specific ATPase/type III secretory pathway virulence-related protein | Back alignment and domain information |
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>gnl|CDD|180762 PRK06936, PRK06936, type III secretion system ATPase; Provisional | Back alignment and domain information |
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>gnl|CDD|181599 PRK08972, fliI, flagellum-specific ATP synthase; Validated | Back alignment and domain information |
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>gnl|CDD|180526 PRK06315, PRK06315, type III secretion system ATPase; Provisional | Back alignment and domain information |
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>gnl|CDD|181182 PRK07960, fliI, flagellum-specific ATP synthase; Validated | Back alignment and domain information |
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>gnl|CDD|181253 PRK08149, PRK08149, ATP synthase SpaL; Validated | Back alignment and domain information |
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>gnl|CDD|31349 COG1155, NtpA, Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] | Back alignment and domain information |
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>gnl|CDD|179776 PRK04192, PRK04192, V-type ATP synthase subunit A; Provisional | Back alignment and domain information |
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>gnl|CDD|162913 TIGR02546, III_secr_ATP, type III secretion apparatus H+-transporting two-sector ATPase | Back alignment and domain information |
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>gnl|CDD|162162 TIGR01026, fliI_yscN, ATPase FliI/YscN family | Back alignment and domain information |
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>gnl|CDD|132536 TIGR03497, FliI_clade2, flagellar protein export ATPase FliI | Back alignment and domain information |
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>gnl|CDD|181092 PRK07721, fliI, flagellum-specific ATP synthase; Validated | Back alignment and domain information |
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>gnl|CDD|180712 PRK06820, PRK06820, type III secretion system ATPase; Validated | Back alignment and domain information |
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>gnl|CDD|169656 PRK09099, PRK09099, type III secretion system ATPase; Provisional | Back alignment and domain information |
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>gnl|CDD|168181 PRK05688, fliI, flagellum-specific ATP synthase; Validated | Back alignment and domain information |
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>gnl|CDD|180875 PRK07196, fliI, flagellum-specific ATP synthase; Validated | Back alignment and domain information |
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>gnl|CDD|136438 PRK07594, PRK07594, type III secretion system ATPase SsaN; Validated | Back alignment and domain information |
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>gnl|CDD|180696 PRK06793, fliI, flagellum-specific ATP synthase; Validated | Back alignment and domain information |
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>gnl|CDD|143799 pfam00006, ATP-synt_ab, ATP synthase alpha/beta family, nucleotide-binding domain | Back alignment and domain information |
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>gnl|CDD|30000 cd01134, V_A-ATPase_A, V/A-type ATP synthase catalytic subunit A | Back alignment and domain information |
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>gnl|CDD|36566 KOG1352, KOG1352, KOG1352, Vacuolar H+-ATPase V1 sector, subunit A [Energy production and conversion] | Back alignment and domain information |
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>gnl|CDD|162171 TIGR01042, V-ATPase_V1_A, V-type (H+)-ATPase V1, A subunit | Back alignment and domain information |
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>gnl|CDD|180863 PRK07165, PRK07165, F0F1 ATP synthase subunit alpha; Validated | Back alignment and domain information |
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>gnl|CDD|29986 cd01120, RecA-like_NTPases, RecA-like NTPases | Back alignment and domain information |
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>gnl|CDD|183622 PRK12608, PRK12608, transcription termination factor Rho; Provisional | Back alignment and domain information |
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>gnl|CDD|162030 TIGR00767, rho, transcription termination factor Rho | Back alignment and domain information |
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>gnl|CDD|181809 PRK09376, rho, transcription termination factor Rho; Provisional | Back alignment and domain information |
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>gnl|CDD|128665 smart00382, AAA, ATPases associated with a variety of cellular activities | Back alignment and domain information |
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>gnl|CDD|30404 COG0055, AtpD, F0F1-type ATP synthase, beta subunit [Energy production and conversion] | Back alignment and domain information |
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>gnl|CDD|183615 PRK12597, PRK12597, F0F1 ATP synthase subunit beta; Provisional | Back alignment and domain information |
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>gnl|CDD|130111 TIGR01039, atpD, ATP synthase, F1 beta subunit | Back alignment and domain information |
---|
>gnl|CDD|36564 KOG1350, KOG1350, KOG1350, F0F1-type ATP synthase, beta subunit [Energy production and conversion] | Back alignment and domain information |
---|
>gnl|CDD|162170 TIGR01041, ATP_syn_B_arch, ATP synthase archaeal, B subunit | Back alignment and domain information |
---|
>gnl|CDD|132348 TIGR03305, alt_F1F0_F1_bet, alternate F1F0 ATPase, F1 subunit beta | Back alignment and domain information |
---|
>gnl|CDD|183987 PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Provisional | Back alignment and domain information |
---|
>gnl|CDD|162134 TIGR00962, atpA, proton translocating ATP synthase, F1 alpha subunit | Back alignment and domain information |
---|
>gnl|CDD|132367 TIGR03324, alt_F1F0_F1_al, alternate F1F0 ATPase, F1 subunit alpha | Back alignment and domain information |
---|
>gnl|CDD|36565 KOG1351, KOG1351, KOG1351, Vacuolar H+-ATPase V1 sector, subunit B [Energy production and conversion] | Back alignment and domain information |
---|
>gnl|CDD|162169 TIGR01040, V-ATPase_V1_B, V-type (H+)-ATPase V1, B subunit | Back alignment and domain information |
---|
>gnl|CDD|130115 TIGR01043, ATP_syn_A_arch, ATP synthase archaeal, A subunit | Back alignment and domain information |
---|
>gnl|CDD|181753 PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated | Back alignment and domain information |
---|
>gnl|CDD|140212 PTZ00185, PTZ00185, ATPase alpha subunit; Provisional | Back alignment and domain information |
---|
>gnl|CDD|29999 cd01133, F1-ATPase_beta, F1 ATP synthase beta subunit, nucleotide-binding domain | Back alignment and domain information |
---|
>gnl|CDD|30001 cd01135, V_A-ATPase_B, V/A-type ATP synthase (non-catalytic) subunit B | Back alignment and domain information |
---|
>gnl|CDD|181752 PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated | Back alignment and domain information |
---|
>gnl|CDD|177000 CHL00060, atpB, ATP synthase CF1 beta subunit | Back alignment and domain information |
---|
>gnl|CDD|29998 cd01132, F1_ATPase_alpha, F1 ATP synthase alpha, central domain | Back alignment and domain information |
---|
>gnl|CDD|31350 COG1156, NtpB, Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion] | Back alignment and domain information |
---|
>gnl|CDD|30405 COG0056, AtpA, F0F1-type ATP synthase, alpha subunit [Energy production and conversion] | Back alignment and domain information |
---|
>gnl|CDD|179779 PRK04196, PRK04196, V-type ATP synthase subunit B; Provisional | Back alignment and domain information |
---|
>gnl|CDD|176999 CHL00059, atpA, ATP synthase CF1 alpha subunit | Back alignment and domain information |
---|
>gnl|CDD|179373 PRK02118, PRK02118, V-type ATP synthase subunit B; Provisional | Back alignment and domain information |
---|
>gnl|CDD|184795 PRK14698, PRK14698, V-type ATP synthase subunit A; Provisional | Back alignment and domain information |
---|
>gnl|CDD|29994 cd01128, rho_factor, Transcription termination factor rho is a bacterial ATP-dependent RNA/DNA helicase | Back alignment and domain information |
---|
>gnl|CDD|31352 COG1158, Rho, Transcription termination factor [Transcription] | Back alignment and domain information |
---|
>gnl|CDD|36567 KOG1353, KOG1353, KOG1353, F0F1-type ATP synthase, alpha subunit [Energy production and conversion] | Back alignment and domain information |
---|
Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
Identity | Alignment graph | Length | Definition | Probability |
Target | 438 | flagellum-specific ATP synthase [Candidatus Liberibacte | ||
TIGR02545 | 439 | ATP_syn_fliI flagellar protein export ATPase FliI; Inte | 100.0 | |
TIGR02546 | 430 | III_secr_ATP type III secretion apparatus H+-transporti | 100.0 | |
TIGR01026 | 455 | fliI_yscN ATPase FliI/YscN family; InterPro: IPR005714 | 100.0 | |
COG1157 | 441 | FliI Flagellar biosynthesis/type III secretory pathway | 100.0 | |
PRK06002 | 450 | fliI flagellum-specific ATP synthase; Validated | 100.0 | |
PRK08972 | 440 | fliI flagellum-specific ATP synthase; Validated | 100.0 | |
PRK05688 | 451 | fliI flagellum-specific ATP synthase; Validated | 100.0 | |
PRK08927 | 441 | fliI flagellum-specific ATP synthase; Validated | 100.0 | |
PRK06936 | 439 | type III secretion system ATPase; Provisional | 100.0 | |
PRK06315 | 442 | type III secretion system ATPase; Provisional | 100.0 | |
TIGR03496 | 411 | FliI_clade1 flagellar protein export ATPase FliI. Membe | 100.0 | |
PRK07960 | 455 | fliI flagellum-specific ATP synthase; Validated | 100.0 | |
PRK09099 | 441 | type III secretion system ATPase; Provisional | 100.0 | |
TIGR03498 | 418 | FliI_clade3 flagellar protein export ATPase FliI. Membe | 100.0 | |
PRK07721 | 435 | fliI flagellum-specific ATP synthase; Validated | 100.0 | |
PRK07196 | 434 | fliI flagellum-specific ATP synthase; Validated | 100.0 | |
PRK07594 | 433 | type III secretion system ATPase; Validated | 100.0 | |
PRK06820 | 445 | type III secretion system ATPase; Validated | 100.0 | |
PRK08472 | 435 | fliI flagellum-specific ATP synthase; Validated | 100.0 | |
PRK08149 | 427 | ATP synthase SpaL; Validated | 100.0 | |
TIGR03497 | 413 | FliI_clade2 flagellar protein export ATPase FliI. Membe | 100.0 | |
PRK06793 | 432 | fliI flagellum-specific ATP synthase; Validated | 100.0 | |
PRK05922 | 434 | type III secretion system ATPase; Validated | 100.0 | |
TIGR00962 | 520 | atpA ATP synthase F1, alpha subunit; InterPro: IPR00529 | 100.0 | |
TIGR03324 | 497 | alt_F1F0_F1_al alternate F1F0 ATPase, F1 subunit alpha. | 100.0 | |
PRK13343 | 502 | F0F1 ATP synthase subunit alpha; Provisional | 100.0 | |
CHL00059 | 501 | atpA ATP synthase CF1 alpha subunit | 100.0 | |
PRK09281 | 502 | F0F1 ATP synthase subunit alpha; Validated | 100.0 | |
PRK04196 | 460 | V-type ATP synthase subunit B; Provisional | 100.0 | |
PRK12597 | 459 | F0F1 ATP synthase subunit beta; Provisional | 100.0 | |
PRK09280 | 466 | F0F1 ATP synthase subunit beta; Validated | 100.0 | |
TIGR03305 | 449 | alt_F1F0_F1_bet alternate F1F0 ATPase, F1 subunit beta. | 100.0 | |
CHL00060 | 480 | atpB ATP synthase CF1 beta subunit | 100.0 | |
PRK02118 | 432 | V-type ATP synthase subunit B; Provisional | 100.0 | |
PRK07165 | 507 | F0F1 ATP synthase subunit alpha; Validated | 100.0 | |
COG0056 | 504 | AtpA F0F1-type ATP synthase, alpha subunit [Energy prod | 100.0 | |
PRK04192 | 585 | V-type ATP synthase subunit A; Provisional | 100.0 | |
COG1156 | 463 | NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy | 100.0 | |
COG0055 | 468 | AtpD F0F1-type ATP synthase, beta subunit [Energy produ | 100.0 | |
TIGR01043 | 584 | ATP_syn_A_arch ATP synthase archaeal, A subunit; InterP | 100.0 | |
KOG1351 | 489 | consensus | 100.0 | |
COG1155 | 588 | NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy | 100.0 | |
KOG1350 | 521 | consensus | 100.0 | |
KOG1352 | 618 | consensus | 100.0 | |
TIGR01041 | 458 | ATP_syn_B_arch ATP synthase archaeal, B subunit; InterP | 100.0 | |
TIGR01040 | 464 | V-ATPase_V1_B V-type ATPase, B subunit; InterPro: IPR00 | 100.0 | |
TIGR01039 | 460 | atpD ATP synthase F1, beta subunit; InterPro: IPR005722 | 100.0 | |
TIGR01042 | 596 | V-ATPase_V1_A V-type ATPase, A subunit; InterPro: IPR00 | 100.0 | |
KOG1353 | 340 | consensus | 100.0 | |
cd01136 | 326 | ATPase_flagellum-secretory_path_III Flagellum-specific | 100.0 | |
cd01135 | 276 | V_A-ATPase_B V/A-type ATP synthase (non-catalytic) subu | 100.0 | |
cd01132 | 274 | F1_ATPase_alpha F1 ATP synthase alpha, central domain. | 100.0 | |
cd01133 | 274 | F1-ATPase_beta F1 ATP synthase beta subunit, nucleotide | 100.0 | |
PTZ00185 | 574 | ATPase alpha subunit; Provisional | 100.0 | |
cd01134 | 369 | V_A-ATPase_A V/A-type ATP synthase catalytic subunit A. | 100.0 | |
pfam00006 | 213 | ATP-synt_ab ATP synthase alpha/beta family, nucleotide- | 100.0 | |
COG1158 | 422 | Rho Transcription termination factor [Transcription] | 100.0 | |
PRK09302 | 501 | circadian clock protein KaiC; Reviewed | 98.29 | |
PRK06067 | 241 | flagellar accessory protein FlaH; Validated | 98.27 | |
pfam06745 | 231 | KaiC KaiC. This family represents a conserved region wi | 98.24 | |
PRK04328 | 250 | hypothetical protein; Provisional | 98.05 | |
COG0467 | 260 | RAD55 RecA-superfamily ATPases implicated in signal tra | 98.05 | |
PRK09361 | 224 | radB DNA repair and recombination protein RadB; Provisi | 97.92 | |
cd01394 | 218 | radB RadB. The archaeal protein radB shares similarity | 97.66 | |
cd01128 | 249 | rho_factor Transcription termination factor rho is a ba | 100.0 | |
PRK12678 | 667 | transcription termination factor Rho; Provisional | 100.0 | |
TIGR00767 | 420 | rho transcription termination factor Rho; InterPro: IPR | 99.81 | |
TIGR00635 | 305 | ruvB Holliday junction DNA helicase RuvB; InterPro: IPR | 95.91 | |
PRK12608 | 379 | transcription termination factor Rho; Provisional | 100.0 | |
PRK09376 | 416 | rho transcription termination factor Rho; Provisional | 100.0 | |
cd01120 | 165 | RecA-like_NTPases RecA-like NTPases. This family includ | 99.94 | |
smart00382 | 148 | AAA ATPases associated with a variety of cellular activ | 98.04 | |
cd01124 | 187 | KaiC KaiC is a circadian clock protein primarily found | 97.59 | |
PRK08533 | 230 | flagellar accessory protein FlaH; Reviewed | 97.13 | |
TIGR03015 | 269 | pepcterm_ATPase putative secretion ATPase, PEP-CTERM lo | 96.58 | |
TIGR02315 | 253 | ABC_phnC phosphonate ABC transporter, ATP-binding prote | 95.14 | |
cd03237 | 246 | ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNa | 95.0 | |
COG1126 | 240 | GlnQ ABC-type polar amino acid transport system, ATPase | 94.69 | |
cd03217 | 200 | ABC_FeS_Assembly ABC-type transport system involved in | 94.43 | |
COG2874 | 235 | FlaH Predicted ATPases involved in biogenesis of archae | 94.21 | |
PRK10982 | 491 | galactose/methyl galaxtoside transporter ATP-binding pr | 93.36 | |
PRK06217 | 185 | hypothetical protein; Validated | 93.21 | |
PRK09700 | 510 | D-allose transporter ATP-binding protein; Provisional | 92.87 | |
pfam02874 | 69 | ATP-synt_ab_N ATP synthase alpha/beta family, beta-barr | 98.04 | |
pfam00306 | 110 | ATP-synt_ab_C ATP synthase alpha/beta chain, C terminal | 97.94 | |
PRK09302 | 501 | circadian clock protein KaiC; Reviewed | 97.86 | |
cd01123 | 235 | Rad51_DMC1_radA Rad51_DMC1_radA,B. This group of recomb | 97.58 | |
pfam00154 | 322 | RecA recA bacterial DNA recombination protein. RecA is | 97.39 | |
PRK13341 | 726 | recombination factor protein RarA/unknown domain fusion | 97.37 | |
cd00983 | 325 | recA RecA is a bacterial enzyme which has roles in homo | 97.28 | |
cd01393 | 226 | recA_like RecA is a bacterial enzyme which has roles in | 97.14 | |
PRK13342 | 417 | recombination factor protein RarA; Reviewed | 97.06 | |
TIGR02236 | 333 | recomb_radA DNA repair and recombination protein RadA; | 96.97 | |
COG2256 | 436 | MGS1 ATPase related to the helicase subunit of the Holl | 96.96 | |
pfam00931 | 285 | NB-ARC NB-ARC domain. | 96.75 | |
PRK09354 | 350 | recA recombinase A; Provisional | 96.68 | |
PRK04301 | 318 | radA DNA repair and recombination protein RadA; Validat | 96.62 | |
pfam05496 | 234 | RuvB_N Holliday junction DNA helicase ruvB N-terminus. | 96.54 | |
PRK11823 | 454 | DNA repair protein RadA; Provisional | 96.44 | |
pfam08423 | 261 | Rad51 Rad51. Rad51 is a DNA repair and recombination pr | 96.42 | |
COG0468 | 279 | RecA RecA/RadA recombinase [DNA replication, recombinat | 96.3 | |
KOG4658 | 889 | consensus | 95.86 | |
cd01121 | 372 | Sms Sms (bacterial radA) DNA repair protein. This prote | 95.34 | |
KOG1969 | 877 | consensus | 95.19 | |
TIGR03263 | 180 | guanyl_kin guanylate kinase. Members of this family are | 95.18 | |
PRK04841 | 903 | transcriptional regulator MalT; Provisional | 95.13 | |
PRK07952 | 242 | DNA replication protein DnaC; Validated | 95.09 | |
cd00544 | 169 | CobU Adenosylcobinamide kinase / adenosylcobinamide pho | 95.01 | |
COG4172 | 534 | ABC-type uncharacterized transport system, duplicated A | 94.91 | |
pfam01637 | 223 | Arch_ATPase Archaeal ATPase. This family contain a cons | 94.89 | |
PRK05541 | 176 | adenylylsulfate kinase; Provisional | 94.68 | |
COG4619 | 223 | ABC-type uncharacterized transport system, ATPase compo | 94.57 | |
KOG2028 | 554 | consensus | 94.5 | |
pfam01583 | 157 | APS_kinase Adenylylsulphate kinase. Enzyme that catalys | 94.24 | |
TIGR02324 | 224 | CP_lyasePhnL phosphonate C-P lyase system protein PhnL; | 94.24 | |
TIGR02204 | 576 | MsbA_rel ABC transporter, permease/ATP-binding protein; | 94.13 | |
CHL00195 | 491 | ycf46 Ycf46; Provisional | 94.12 | |
TIGR00064 | 284 | ftsY signal recognition particle-docking protein FtsY; | 94.11 | |
PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 94.06 | |
KOG0735 | 952 | consensus | 94.05 | |
COG1474 | 366 | CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA | 94.05 | |
cd00071 | 137 | GMPK Guanosine monophosphate kinase (GMPK, EC 2.7.4.8), | 93.44 | |
COG0444 | 316 | DppD ABC-type dipeptide/oligopeptide/nickel transport s | 93.41 | |
cd02027 | 149 | APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyze | 93.08 | |
COG0194 | 191 | Gmk Guanylate kinase [Nucleotide transport and metaboli | 93.03 | |
PRK05800 | 170 | cobU adenosylcobinamide kinase/adenosylcobinamide-phosp | 92.83 | |
COG4136 | 213 | ABC-type uncharacterized transport system, ATPase compo | 92.81 | |
KOG1433 | 326 | consensus | 92.66 | |
PRK03846 | 198 | adenylylsulfate kinase; Provisional | 92.66 | |
cd04150 | 159 | Arf1_5_like Arf1-Arf5-like subfamily. This subfamily co | 92.48 | |
cd04149 | 168 | Arf6 Arf6 subfamily. Arf6 (ADP ribosylation factor 6) p | 92.46 | |
pfam00625 | 182 | Guanylate_kin Guanylate kinase. | 92.42 | |
TIGR02982 | 220 | heterocyst_DevA ABC exporter ATP-binding subunit, DevA | 92.2 | |
pfam03308 | 267 | ArgK ArgK protein. The ArgK protein acts as an ATPase e | 92.03 | |
COG0563 | 178 | Adk Adenylate kinase and related kinases [Nucleotide tr | 92.02 | |
TIGR01193 | 710 | bacteriocin_ABC ABC-type bacteriocin transporter; Inter | 91.92 | |
COG0552 | 340 | FtsY Signal recognition particle GTPase [Intracellular | 91.84 | |
PRK00889 | 175 | adenylylsulfate kinase; Provisional | 91.75 | |
cd04162 | 164 | Arl9_Arfrp2_like Arl9/Arfrp2-like subfamily. Arl9 (Arf- | 91.25 | |
PRK00300 | 208 | gmk guanylate kinase; Provisional | 91.16 | |
PTZ00133 | 182 | ADP-ribosylation factor; Provisional | 90.87 | |
cd04158 | 169 | ARD1 ARD1 subfamily. ARD1 (ADP-ribosylation factor doma | 90.85 | |
KOG0737 | 386 | consensus | 90.85 | |
smart00177 | 175 | ARF ARF-like small GTPases; ARF, ADP-ribosylation facto | 90.68 | |
pfam06414 | 191 | Zeta_toxin Zeta toxin. This family consists of several | 90.65 | |
TIGR00067 | 262 | glut_race glutamate racemase; InterPro: IPR004391 Gluta | 90.41 | |
PRK09435 | 325 | arginine/ornithine transport system ATPase; Provisional | 90.04 | |
PRK13631 | 320 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 96.79 | |
PRK11160 | 575 | cysteine/glutathione ABC transporter membrane/ATP-bindi | 96.52 | |
cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide variety of | 96.28 | |
pfam03796 | 186 | DnaB_C DnaB-like helicase C terminal domain. The hexame | 96.27 | |
COG1124 | 252 | DppF ABC-type dipeptide/oligopeptide/nickel transport s | 96.15 | |
PRK10636 | 638 | putative ABC transporter ATP-binding protein; Provision | 96.04 | |
TIGR02868 | 566 | CydC ABC transporter, CydDC cysteine exporter (CydDC-E) | 96.03 | |
COG1116 | 248 | TauB ABC-type nitrate/sulfonate/bicarbonate transport s | 96.03 | |
TIGR03608 | 206 | L_ocin_972_ABC putative bacteriocin export ABC transpor | 95.92 | |
PRK03992 | 390 | proteasome-activating nucleotidase; Provisional | 95.86 | |
TIGR01277 | 213 | thiQ thiamine ABC transporter, ATP-binding protein; Int | 95.81 | |
TIGR03265 | 353 | PhnT2 putative 2-aminoethylphosphonate ABC transport sy | 95.78 | |
cd03295 | 242 | ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding com | 95.77 | |
cd03257 | 228 | ABC_NikE_OppD_transporters The ABC transporter subfamil | 95.75 | |
PRK10584 | 228 | putative ABC transporter ATP-binding protein YbbA; Prov | 95.73 | |
cd03300 | 232 | ABC_PotA_N PotA is an ABC-type transporter and the ATPa | 95.71 | |
PRK11147 | 632 | ABC transporter ATPase component; Reviewed | 95.71 | |
TIGR00972 | 248 | 3a0107s01c2 phosphate ABC transporter, ATP-binding prot | 95.68 | |
cd03294 | 269 | ABC_Pro_Gly_Bertaine This family comprises the glycine | 95.67 | |
PRK11819 | 556 | putative ABC transporter ATP-binding protein; Reviewed | 95.66 | |
TIGR03258 | 362 | PhnT 2-aminoethylphosphonate ABC transport system, ATP- | 95.66 | |
PRK10070 | 400 | glycine betaine transporter ATP-binding subunit; Provis | 95.65 | |
cd03293 | 220 | ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-bi | 95.64 | |
cd03298 | 211 | ABC_ThiQ_thiamine_transporter ABC-type thiamine tranpor | 95.63 | |
cd03289 | 275 | ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibr | 95.62 | |
cd03229 | 178 | ABC_Class3 This class is comprised of all BPD (Binding | 95.61 | |
pfam05729 | 165 | NACHT NACHT domain. This NTPase domain is found in apop | 95.61 | |
cd03247 | 178 | ABCC_cytochrome_bd The CYD subfamily implicated in cyto | 95.58 | |
cd03369 | 207 | ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type tr | 95.57 | |
cd03223 | 166 | ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette | 95.51 | |
PRK10744 | 257 | phosphate transporter subunit; Provisional | 95.51 | |
cd03253 | 236 | ABCC_ATM1_transporter ATM1 is an ABC transporter that i | 95.5 | |
cd03262 | 213 | ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-bindi | 95.49 | |
TIGR03415 | 382 | ABC_choXWV_ATP choline ABC transporter, ATP-binding pro | 95.48 | |
TIGR02142 | 361 | modC_ABC molybdate ABC transporter, ATP-binding protein | 95.48 | |
cd03299 | 235 | ABC_ModC_like Archeal protein closely related to ModC. | 95.47 | |
cd03301 | 213 | ABC_MalK_N The N-terminal ATPase domain of the maltose | 95.47 | |
PRK11650 | 358 | ugpC glycerol-3-phosphate transporter ATP-binding subun | 95.46 | |
PRK10771 | 233 | thiQ thiamine transporter ATP-binding subunit; Provisio | 95.46 | |
COG3842 | 352 | PotA ABC-type spermidine/putrescine transport systems, | 95.45 | |
COG4987 | 573 | CydC ABC-type transport system involved in cytochrome b | 95.45 | |
PRK11248 | 255 | tauB taurine transporter ATP-binding subunit; Provision | 95.45 | |
COG1136 | 226 | SalX ABC-type antimicrobial peptide transport system, A | 95.43 | |
PRK13648 | 269 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 95.43 | |
PRK11432 | 351 | fbpC ferric transporter ATP-binding subunit; Provisiona | 95.42 | |
cd03249 | 238 | ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a | 95.42 | |
cd03228 | 171 | ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-lik | 95.39 | |
cd03255 | 218 | ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ07 | 95.39 | |
cd03261 | 235 | ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) tr | 95.37 | |
cd03260 | 227 | ABC_PstB_phosphate_transporter Phosphate uptake is of f | 95.36 | |
PRK10419 | 266 | nikE nickel transporter ATP-binding protein; Provisiona | 95.34 | |
cd03250 | 204 | ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This | 95.33 | |
cd03246 | 173 | ABCC_Protease_Secretion This family represents the ABC | 95.32 | |
PRK11701 | 258 | phnK phosphonates transport ATP-binding protein; Provis | 95.32 | |
cd03248 | 226 | ABCC_TAP TAP, the Transporter Associated with Antigen P | 95.31 | |
PRK09452 | 378 | potA putrescine/spermidine ABC transporter ATPase prote | 95.3 | |
PRK10247 | 225 | putative ABC transporter ATP-binding protein YbbL; Prov | 95.29 | |
cd03291 | 282 | ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibr | 95.27 | |
cd03222 | 177 | ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor ( | 95.27 | |
PRK13637 | 287 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 95.25 | |
cd03290 | 218 | ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor | 95.25 | |
PRK10851 | 352 | sulfate/thiosulfate transporter subunit; Provisional | 95.24 | |
cd03256 | 241 | ABC_PhnC_transporter ABC-type phosphate/phosphonate tra | 95.23 | |
PRK11607 | 377 | potG putrescine transporter ATP-binding subunit; Provis | 95.21 | |
cd03297 | 214 | ABC_ModC_molybdenum_transporter ModC is an ABC-type tra | 95.21 | |
PRK11000 | 369 | maltose/maltodextrin transporter ATP-binding protein; P | 95.2 | |
cd03234 | 226 | ABCG_White The White subfamily represents ABC transport | 95.19 | |
PRK08118 | 167 | topology modulation protein; Reviewed | 95.19 | |
PRK13633 | 281 | cobalt transporter ATP-binding subunit; Provisional | 95.19 | |
COG1066 | 456 | Sms Predicted ATP-dependent serine protease [Posttransl | 95.18 | |
PRK13635 | 279 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 95.18 | |
cd03296 | 239 | ABC_CysA_sulfate_importer Part of the ABC transporter c | 95.17 | |
PRK11831 | 269 | putative ABC transporter ATP-binding protein YrbF; Prov | 95.16 | |
cd03292 | 214 | ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-b | 95.16 | |
cd03251 | 234 | ABCC_MsbA MsbA is an essential ABC transporter, closely | 95.14 | |
PRK11629 | 233 | lolD lipoprotein transporter ATP-binding subunit; Provi | 95.13 | |
PRK13634 | 276 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 95.13 | |
PRK11264 | 248 | putative amino-acid ABC transporter ATP-binding protein | 95.13 | |
PRK11176 | 581 | lipid transporter ATP-binding/permease protein; Provisi | 95.12 | |
PRK13546 | 264 | teichoic acids export protein ATP-binding subunit; Prov | 95.11 | |
PRK13642 | 277 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 95.11 | |
cd03225 | 211 | ABC_cobalt_CbiO_domain1 Domain I of the ABC component o | 95.1 | |
PRK11174 | 588 | cysteine/glutathione ABC transporter membrane/ATP-bindi | 95.1 | |
cd03220 | 224 | ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter | 95.09 | |
PRK13657 | 585 | cyclic beta-1,2-glucan ABC transporter; Provisional | 95.09 | |
PRK10789 | 569 | putative multidrug transporter membrane\ATP-binding com | 95.08 | |
PRK13650 | 276 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 95.08 | |
cd03233 | 202 | ABC_PDR_domain1 The pleiotropic drug resistance (PDR) f | 95.07 | |
PRK10522 | 547 | multidrug transporter membrane component/ATP-binding co | 95.06 | |
cd03226 | 205 | ABC_cobalt_CbiO_domain2 Domain II of the ABC component | 95.05 | |
PRK09544 | 251 | znuC high-affinity zinc transporter ATPase; Reviewed | 95.01 | |
cd03244 | 221 | ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This | 95.01 | |
COG3839 | 338 | MalK ABC-type sugar transport systems, ATPase component | 95.0 | |
PRK13646 | 286 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 95.0 | |
cd03258 | 233 | ABC_MetN_methionine_transporter MetN (also known as Yus | 94.99 | |
PRK13640 | 283 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 94.99 | |
cd03245 | 220 | ABCC_bacteriocin_exporters ABC-type bacteriocin exporte | 94.99 | |
PRK09493 | 240 | glnQ glutamine ABC transporter ATP-binding protein; Rev | 94.98 | |
PRK13538 | 204 | cytochrome c biogenesis protein CcmA; Provisional | 94.96 | |
PRK11124 | 242 | artP arginine transporter ATP-binding subunit; Provisio | 94.96 | |
PRK09984 | 262 | phosphonate/organophosphate ester transporter subunit; | 94.91 | |
cd03231 | 201 | ABC_CcmA_heme_exporter CcmA, the ATP-binding component | 94.9 | |
PRK13543 | 214 | cytochrome c biogenesis protein CcmA; Provisional | 94.9 | |
PRK10790 | 593 | putative multidrug transporter membrane\ATP-binding com | 94.89 | |
PRK13632 | 273 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 94.89 | |
PRK10575 | 265 | iron-hydroxamate transporter ATP-binding subunit; Provi | 94.86 | |
PRK13652 | 277 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 94.86 | |
cd03224 | 222 | ABC_TM1139_LivF_branched LivF (TM1139) is part of the L | 94.84 | |
COG3638 | 258 | ABC-type phosphate/phosphonate transport system, ATPase | 94.83 | |
PRK13542 | 224 | consensus | 94.83 | |
TIGR02211 | 221 | LolD_lipo_ex lipoprotein releasing system, ATP-binding | 94.82 | |
PRK13651 | 304 | cobalt transporter ATP-binding subunit; Provisional | 94.8 | |
PRK11247 | 257 | ssuB aliphatic sulfonates transport ATP-binding subunit | 94.8 | |
cd03235 | 213 | ABC_Metallic_Cations ABC component of the metal-type tr | 94.77 | |
PRK13540 | 200 | cytochrome c biogenesis protein CcmA; Provisional | 94.74 | |
cd03288 | 257 | ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor S | 94.74 | |
COG1125 | 309 | OpuBA ABC-type proline/glycine betaine transport system | 94.73 | |
COG2274 | 709 | SunT ABC-type bacteriocin/lantibiotic exporters, contai | 94.72 | |
cd03236 | 255 | ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 of RNa | 94.72 | |
COG0488 | 530 | Uup ATPase components of ABC transporters with duplicat | 94.69 | |
PRK10619 | 257 | histidine/lysine/arginine/ornithine transporter subunit | 94.69 | |
cd03254 | 229 | ABCC_Glucan_exporter_like Glucan exporter ATP-binding p | 94.68 | |
PRK13644 | 274 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 94.64 | |
COG1120 | 258 | FepC ABC-type cobalamin/Fe3+-siderophores transport sys | 94.63 | |
CHL00131 | 252 | ycf16 sulfate ABC transporter protein; Validated | 94.62 | |
PRK13647 | 273 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 94.62 | |
TIGR00955 | 671 | 3a01204 Pigment precourser permease; InterPro: IPR00528 | 94.62 | |
PRK13547 | 273 | hmuV hemin importer ATP-binding subunit; Provisional | 94.6 | |
PRK03695 | 245 | vitamin B12-transporter ATPase; Provisional | 94.6 | |
pfam00004 | 131 | AAA ATPase family associated with various cellular acti | 94.6 | |
PRK09580 | 248 | sufC cysteine desulfurase ATPase component; Reviewed | 94.6 | |
PRK13649 | 280 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 94.58 | |
PRK13643 | 288 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 94.57 | |
PRK11153 | 343 | metN DL-methionine transporter ATP-binding subunit; Pro | 94.56 | |
KOG0057 | 591 | consensus | 94.52 | |
PRK11144 | 352 | modC molybdate transporter ATP-binding protein; Provisi | 94.5 | |
PRK11308 | 327 | dppF dipeptide transporter ATP-binding subunit; Provisi | 94.49 | |
PRK13548 | 257 | hmuV hemin importer ATP-binding subunit; Provisional | 94.49 | |
PRK11231 | 255 | fecE iron-dicitrate transporter ATP-binding subunit; Pr | 94.47 | |
PRK11614 | 237 | livF leucine/isoleucine/valine transporter ATP-binding | 94.47 | |
PRK10895 | 241 | putative ABC transporter ATP-binding protein YhbG; Prov | 94.43 | |
PRK09473 | 330 | oppD oligopeptide transporter ATP-binding component; Pr | 94.43 | |
COG4988 | 559 | CydD ABC-type transport system involved in cytochrome b | 94.41 | |
PRK10908 | 222 | cell division protein FtsE; Provisional | 94.39 | |
PRK13645 | 289 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 94.37 | |
TIGR03410 | 230 | urea_trans_UrtE urea ABC transporter, ATP-binding prote | 94.36 | |
cd03252 | 237 | ABCC_Hemolysin The ABC-transporter hemolysin B is a cen | 94.35 | |
cd03259 | 213 | ABC_Carb_Solutes_like ABC Carbohydrate and Solute Trans | 94.31 | |
COG1127 | 263 | Ttg2A ABC-type transport system involved in resistance | 94.3 | |
PRK12422 | 455 | chromosomal replication initiation protein; Provisional | 94.29 | |
cd03218 | 232 | ABC_YhbG The ABC transporters belonging to the YhbG fam | 94.28 | |
PRK13639 | 275 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 94.27 | |
PRK13539 | 206 | cytochrome c biogenesis protein CcmA; Provisional | 94.27 | |
PRK11300 | 255 | livG leucine/isoleucine/valine transporter ATP-binding | 94.26 | |
cd03214 | 180 | ABC_Iron-Siderophores_B12_Hemin ABC transporters, invol | 94.26 | |
cd03221 | 144 | ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cyt | 94.25 | |
PRK11022 | 327 | dppD dipeptide transporter ATP-binding subunit; Provisi | 94.21 | |
cd03263 | 220 | ABC_subfamily_A The ABCA subfamily mediates the transpo | 94.2 | |
PRK10253 | 265 | iron-enterobactin transporter ATP-binding protein; Prov | 94.2 | |
PRK13636 | 285 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 94.18 | |
cd00267 | 157 | ABC_ATPase ABC (ATP-binding cassette) transporter nucle | 94.15 | |
TIGR03411 | 242 | urea_trans_UrtD urea ABC transporter, ATP-binding prote | 94.12 | |
PRK09536 | 409 | btuD corrinoid ABC transporter ATPase; Reviewed | 94.08 | |
COG1123 | 539 | ATPase components of various ABC-type transport systems | 94.06 | |
COG3840 | 231 | ThiQ ABC-type thiamine transport system, ATPase compone | 94.04 | |
cd03232 | 192 | ABC_PDR_domain2 The pleiotropic drug resistance-like (P | 93.97 | |
COG1134 | 249 | TagH ABC-type polysaccharide/polyol phosphate transport | 93.92 | |
PRK13409 | 590 | putative ATPase RIL; Provisional | 93.91 | |
PRK13544 | 208 | consensus | 93.9 | |
TIGR01186 | 372 | proV glycine betaine/L-proline transport ATP binding su | 93.9 | |
TIGR02857 | 570 | CydD ABC transporter, CydDC cysteine exporter (CydDC-E) | 93.88 | |
PRK13641 | 286 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 93.87 | |
COG4181 | 228 | Predicted ABC-type transport system involved in lysopho | 93.87 | |
cd03269 | 210 | ABC_putative_ATPase This subfamily is involved in drug | 93.81 | |
cd03267 | 236 | ABC_NatA_like Similar in sequence to NatA, this is the | 93.75 | |
cd03213 | 194 | ABCG_EPDR ABCG transporters are involved in eye pigment | 93.73 | |
PRK13545 | 549 | tagH teichoic acids export protein ATP-binding subunit; | 93.71 | |
PRK13541 | 195 | cytochrome c biogenesis protein CcmA; Provisional | 93.69 | |
cd03271 | 261 | ABC_UvrA_II The excision repair protein UvrA domain II; | 93.68 | |
PRK13638 | 271 | cbiO cobalt transporter ATP-binding subunit; Provisiona | 93.67 | |
TIGR01187 | 331 | potA polyamine ABC transporter, ATP-binding protein; In | 93.64 | |
cd03219 | 236 | ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporte | 93.61 | |
PRK10261 | 623 | glutathione transporter ATP-binding protein; Provisiona | 93.57 | |
PRK10938 | 490 | putative molybdenum transport ATP-binding protein ModF; | 93.55 | |
COG4167 | 267 | SapF ABC-type antimicrobial peptide transport system, A | 93.54 | |
cd03230 | 173 | ABC_DR_subfamily_A This family of ATP-binding proteins | 93.54 | |
cd03215 | 182 | ABC_Carb_Monos_II This family represents domain II of t | 93.53 | |
PRK10418 | 254 | nikD nickel transporter ATP-binding protein; Provisiona | 93.52 | |
PRK05595 | 444 | replicative DNA helicase; Provisional | 93.44 | |
TIGR02673 | 215 | FtsE cell division ATP-binding protein FtsE; InterPro: | 93.43 | |
COG4525 | 259 | TauB ABC-type taurine transport system, ATPase componen | 93.43 | |
cd03216 | 163 | ABC_Carb_Monos_I This family represents the domain I of | 93.43 | |
COG1118 | 345 | CysA ABC-type sulfate/molybdate transport systems, ATPa | 93.4 | |
TIGR02769 | 267 | nickel_nikE nickel import ATP-binding protein NikE; Int | 93.37 | |
COG1132 | 567 | MdlB ABC-type multidrug transport system, ATPase and pe | 93.34 | |
pfam03193 | 161 | DUF258 Protein of unknown function, DUF258. | 93.33 | |
TIGR00968 | 241 | 3a0106s01 sulfate ABC transporter, ATP-binding protein; | 93.29 | |
cd03265 | 220 | ABC_DrrA DrrA is the ATP-binding protein component of a | 93.25 | |
TIGR01846 | 703 | type_I_sec_HlyB type I secretion system ATPase; InterPr | 93.19 | |
COG1131 | 293 | CcmA ABC-type multidrug transport system, ATPase compon | 93.19 | |
TIGR00750 | 333 | lao LAO/AO transport system ATPase; InterPro: IPR005129 | 93.17 | |
PTZ00265 | 1467 | multidrug resistance protein (mdr1); Provisional | 93.15 | |
PRK13536 | 306 | nodulation factor exporter subunit NodI; Provisional | 93.08 | |
COG1162 | 301 | Predicted GTPases [General function prediction only] | 93.01 | |
COG1117 | 253 | PstB ABC-type phosphate transport system, ATPase compon | 93.0 | |
PRK13537 | 304 | lipooligosaccharide transporter ATP-binding subunit; Pr | 93.0 | |
COG1122 | 235 | CbiO ABC-type cobalt transport system, ATPase component | 92.97 | |
PRK10787 | 784 | DNA-binding ATP-dependent protease La; Provisional | 92.93 | |
cd03238 | 176 | ABC_UvrA The excision repair protein UvrA; Nucleotide e | 92.88 | |
cd03264 | 211 | ABC_drug_resistance_like ABC-type multidrug transport s | 92.84 | |
PRK08084 | 235 | DNA replication initiation factor; Provisional | 92.79 | |
PRK00098 | 298 | ribosome-associated GTPase; Reviewed | 92.76 | |
PRK08082 | 453 | consensus | 92.76 | |
PRK08506 | 473 | replicative DNA helicase; Provisional | 92.73 | |
TIGR03522 | 301 | GldA_ABC_ATP gliding motility-associated ABC transporte | 92.72 | |
COG4608 | 268 | AppF ABC-type oligopeptide transport system, ATPase com | 92.68 | |
COG4178 | 604 | ABC-type uncharacterized transport system, permease and | 92.65 | |
PRK08006 | 471 | replicative DNA helicase; Provisional | 92.65 | |
TIGR03600 | 421 | phage_DnaB phage replicative helicase, DnaB family, HK0 | 92.63 | |
TIGR00763 | 941 | lon ATP-dependent protease La; InterPro: IPR004815 Prot | 92.63 | |
cd03268 | 208 | ABC_BcrA_bacitracin_resist The BcrA subfamily represent | 92.57 | |
PRK05748 | 448 | replicative DNA helicase; Provisional | 92.57 | |
COG4618 | 580 | ArpD ABC-type protease/lipase transport system, ATPase | 92.55 | |
KOG0055 | 1228 | consensus | 92.48 | |
cd03278 | 197 | ABC_SMC_barmotin Barmotin is a tight junction-associate | 92.42 | |
COG1135 | 339 | AbcC ABC-type metal ion transport system, ATPase compon | 92.39 | |
PRK01889 | 353 | ribosome-associated GTPase; Reviewed | 92.38 | |
PRK05642 | 234 | DNA replication initiation factor; Validated | 92.33 | |
COG2255 | 332 | RuvB Holliday junction resolvasome, helicase subunit [D | 92.33 | |
PRK12288 | 344 | ribosome-associated GTPase; Reviewed | 92.33 | |
cd03266 | 218 | ABC_NatA_sodium_exporter NatA is the ATPase component o | 92.29 | |
TIGR00929 | 931 | VirB4_CagE type IV secretion/conjugal transfer ATPase, | 92.28 | |
COG0466 | 782 | Lon ATP-dependent Lon protease, bacterial type [Posttra | 92.24 | |
PRK13549 | 513 | xylose transporter ATP-binding subunit; Provisional | 92.23 | |
PRK08233 | 182 | hypothetical protein; Provisional | 92.1 | |
KOG0062 | 582 | consensus | 92.07 | |
cd04102 | 202 | RabL3 RabL3 (Rab-like3) subfamily. RabL3s are novel pro | 92.06 | |
PRK13873 | 815 | conjugal transfer ATPase TrbE; Provisional | 91.84 | |
PRK08840 | 464 | replicative DNA helicase; Provisional | 91.83 | |
TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Members | 91.8 | |
PRK06749 | 428 | replicative DNA helicase; Provisional | 91.7 | |
cd02023 | 198 | UMPK Uridine monophosphate kinase (UMPK, EC 2.7.1.48), | 91.67 | |
TIGR01166 | 190 | cbiO cobalt ABC transporter, ATP-binding protein; Inter | 91.66 | |
TIGR03269 | 520 | met_CoM_red_A2 methyl coenzyme M reductase system, comp | 91.61 | |
PRK07263 | 453 | consensus | 91.59 | |
COG4586 | 325 | ABC-type uncharacterized transport system, ATPase compo | 91.45 | |
PRK10762 | 501 | D-ribose transporter ATP binding protein; Provisional | 91.4 | |
PRK09165 | 484 | replicative DNA helicase; Provisional | 91.37 | |
PRK00149 | 447 | dnaA chromosomal replication initiation protein; Review | 91.27 | |
PRK09700 | 510 | D-allose transporter ATP-binding protein; Provisional | 91.14 | |
cd03270 | 226 | ABC_UvrA_I The excision repair protein UvrA domain I; N | 91.11 | |
COG1119 | 257 | ModF ABC-type molybdenum transport system, ATPase compo | 91.1 | |
PRK13830 | 818 | conjugal transfer protein TrbE; Provisional | 91.0 | |
PRK00080 | 328 | ruvB Holliday junction DNA helicase RuvB; Reviewed | 91.0 | |
COG4148 | 352 | ModC ABC-type molybdate transport system, ATPase compon | 90.99 | |
PRK06904 | 472 | replicative DNA helicase; Validated | 90.93 | |
PTZ00243 | 1560 | ABC transporter; Provisional | 90.91 | |
pfam07726 | 131 | AAA_3 ATPase family associated with various cellular ac | 90.89 | |
cd02028 | 179 | UMPK_like Uridine monophosphate kinase_like (UMPK_like) | 90.83 | |
cd02024 | 187 | NRK1 Nicotinamide riboside kinase (NRK) is an enzyme in | 90.77 | |
PRK13891 | 852 | conjugal transfer protein TrbE; Provisional | 90.76 | |
COG1100 | 219 | GTPase SAR1 and related small G proteins [General funct | 90.74 | |
PRK10982 | 491 | galactose/methyl galaxtoside transporter ATP-binding pr | 90.7 | |
COG4555 | 245 | NatA ABC-type Na+ transport system, ATPase component [E | 90.63 | |
cd01122 | 271 | GP4d_helicase GP4d_helicase is a homohexameric 5'-3' he | 90.61 | |
PRK05201 | 442 | hslU ATP-dependent protease ATP-binding subunit; Provis | 90.56 | |
cd03227 | 162 | ABC_Class2 ABC-type Class 2 contains systems involved i | 90.45 | |
PRK08760 | 476 | replicative DNA helicase; Provisional | 90.42 | |
TIGR03598 | 179 | GTPase_YsxC ribosome biogenesis GTP-binding protein Ysx | 90.38 | |
pfam08477 | 118 | Miro Miro-like protein. Mitochondrial Rho proteins (Mir | 90.33 | |
PRK05480 | 209 | uridine kinase; Provisional | 90.3 | |
PRK08694 | 468 | consensus | 90.25 | |
COG0410 | 237 | LivF ABC-type branched-chain amino acid transport syste | 90.2 | |
cd03240 | 204 | ABC_Rad50 The catalytic domains of Rad50 are similar to | 90.19 | |
cd04101 | 164 | RabL4 RabL4 (Rab-like4) subfamily. RabL4s are novel pro | 90.16 | |
PRK07004 | 460 | replicative DNA helicase; Provisional | 90.14 | |
COG0464 | 494 | SpoVK ATPases of the AAA+ class [Posttranslational modi | 90.14 | |
PRK07429 | 331 | phosphoribulokinase; Provisional | 90.13 | |
COG1155 | 588 | NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy | 96.72 | |
PRK10762 | 501 | D-ribose transporter ATP binding protein; Provisional | 93.45 | |
TIGR02782 | 315 | TrbB_P P-type conjugative transfer ATPase TrbB; InterPr | 96.47 | |
COG1222 | 406 | RPT1 ATP-dependent 26S proteasome regulatory subunit [P | 93.56 | |
cd01854 | 287 | YjeQ_engC YjeQ/EngC. YjeQ (YloQ in Bacillus subtilis) r | 93.45 | |
KOG0743 | 457 | consensus | 95.98 | |
PTZ00035 | 350 | Rad51; Provisional | 95.74 | |
PRK10636 | 638 | putative ABC transporter ATP-binding protein; Provision | 95.56 | |
KOG0055 | 1228 | consensus | 91.89 | |
TIGR01842 | 556 | type_I_sec_PrtD type I secretion system ATPase; InterPr | 95.53 | |
TIGR02203 | 603 | MsbA_lipidA lipid A export permease/ATP-binding protein | 94.73 | |
PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 90.39 | |
PRK11147 | 632 | ABC transporter ATPase component; Reviewed | 95.38 | |
COG1123 | 539 | ATPase components of various ABC-type transport systems | 94.01 | |
PRK10261 | 623 | glutathione transporter ATP-binding protein; Provisiona | 92.67 | |
PRK07261 | 171 | topology modulation protein; Provisional | 95.03 | |
PRK04195 | 403 | replication factor C large subunit; Provisional | 94.68 | |
COG2909 | 894 | MalT ATP-dependent transcriptional regulator [Transcrip | 94.15 | |
TIGR01184 | 230 | ntrCD nitrate ABC transporter, ATP-binding proteins C a | 93.98 | |
KOG0727 | 408 | consensus | 93.7 | |
TIGR01242 | 364 | 26Sp45 26S proteasome subunit P45 family; InterPro: IPR | 93.36 | |
TIGR02858 | 282 | spore_III_AA stage III sporulation protein AA; InterPro | 93.32 | |
TIGR01271 | 1534 | CFTR_protein cystic fibrosis transmembrane conductor re | 92.62 | |
pfam01695 | 178 | IstB IstB-like ATP binding protein. This protein contai | 92.36 | |
pfam02283 | 166 | CobU Cobinamide kinase / cobinamide phosphate guanyltra | 94.79 | |
COG0488 | 530 | Uup ATPase components of ABC transporters with duplicat | 94.1 | |
TIGR02640 | 265 | gas_vesic_GvpN gas vesicle protein GvpN; InterPro: IPR0 | 91.49 | |
PRK11288 | 501 | araG L-arabinose transporter ATP-binding protein; Provi | 94.72 | |
PRK11819 | 556 | putative ABC transporter ATP-binding protein; Reviewed | 94.72 | |
TIGR03269 | 520 | met_CoM_red_A2 methyl coenzyme M reductase system, comp | 94.4 | |
PRK11288 | 501 | araG L-arabinose transporter ATP-binding protein; Provi | 94.16 | |
PRK13549 | 513 | xylose transporter ATP-binding subunit; Provisional | 93.85 | |
TIGR03375 | 694 | type_I_sec_LssB type I secretion system ATPase, LssB fa | 94.42 | |
PRK09519 | 790 | recA recombinase A; Reviewed | 93.48 | |
PRK10535 | 648 | macrolide transporter ATP-binding /permease protein; Pr | 93.39 | |
PRK13409 | 590 | putative ATPase RIL; Provisional | 92.96 | |
PRK12289 | 351 | ribosome-associated GTPase; Reviewed | 92.63 | |
KOG0060 | 659 | consensus | 92.52 |
>TIGR02545 ATP_syn_fliI flagellar protein export ATPase FliI; InterPro: IPR013379 FliI proteins are involved in bacterial flagellum systems, acting to drive protein export for flagellar biosynthesis | Back alignment and domain information |
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>TIGR02546 III_secr_ATP type III secretion apparatus H+-transporting two-sector ATPase; InterPro: IPR013380 Proteins in this entry are found in a variety of bacteria, and are predicted to be ATPases involved in type III secretion systems | Back alignment and domain information |
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>TIGR01026 fliI_yscN ATPase FliI/YscN family; InterPro: IPR005714 Proteins in this entry show extensive homology to the ATP synthase F1 beta subunit, and are involved in type III protein secretion | Back alignment and domain information |
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>COG1157 FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
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