HHsearch alignment for GI: 254780684 and conserved domain: COG0552

Probab=91.84  E-value=0.78  Score=25.07  Aligned_cols=84  Identities=20%  Similarity=0.239  Sum_probs=47.6

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHH--CCCCCEEEEECCCCCHHHHHHHHHHHCCC-CCCEEEEE-ECCCCCHHHHHHHHHH
Q ss_conf             50375266788999999998740--78983899312465223889999864277-55328984-1577880344444456
Q gi|254780684|r  162 QRIGVFAGSGIGKSTLLSMFARS--DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVV-ATSDESPILRKMAPLT  237 (438)
Q Consensus       162 QR~gIfg~~GvGKt~Ll~~i~~~--~~~dv~V~alIGeR~rev~efi~~~~~~~-l~~tvvv~-~t~d~~~~~r~~a~~~  237 (438)
T Consensus       140 ~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA-~DTFRAaA--iEQL~~w~er~gv~vI~~~~G~DpAaV----afD  212 (340)
T COG0552         140 FVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAA-GDTFRAAA--IEQLEVWGERLGVPVISGKEGADPAAV----AFD  212 (340)
T ss_pred             EEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEE-CCHHHHHH--HHHHHHHHHHHCCEEECCCCCCCCHHH----HHH
T ss_conf             79999934888637179999999997898699982-33478999--999999999959927825999980899----999


Q ss_pred             HHHHHHHHHHCCCCEEEE
Q ss_conf             777888864267988999
Q gi|254780684|r  238 AVTIAEYFSSKGDNVLLI  255 (438)
Q Consensus       238 a~~iAEyfr~~G~~Vll~  255 (438)
T Consensus       213 Ai~~---Akar~~Dvvli  227 (340)
T COG0552         213 AIQA---AKARGIDVVLI  227 (340)
T ss_pred             HHHH---HHHCCCCEEEE
T ss_conf             9999---99769999999