HHsearch alignment for GI: 254780684 and conserved domain: COG1156
>COG1156 NtpB Archaeal/vacuolar-type H+-ATPase subunit B [Energy production and conversion].
Probab=100.00 E-value=0 Score=639.73 Aligned_cols=411 Identities=27% Similarity=0.413 Sum_probs=381.2
Q ss_pred EEEEEEEEEEECCEEEEECCCCCCCCCCEEEEECCCC-CEEEEEEEECCCEEEEEECCCCCCCCCCCE-EEECCC-CEEE
Q ss_conf 1201289999525899982688887351899956996-079999974199799998048557467888-997288-5552
Q gi|254780684|r 20 VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS-DNLGQVIRINLDIVYICPVGIGEEISLGDL-VFHWGR-FRIS 96 (438)
Q Consensus 20 ~~~~G~V~~V~G~ii~v~Gl~~~v~iGelv~i~~~~~-~v~geVi~~~~~~~~l~~~~~~~gI~~G~~-V~~~g~-~~i~ 96 (438)
T Consensus 4 ~~~Y~~i~~i~Gplv~ve~~e-g~~y~E~v~i~~~~G~~r~gqVle~~~~~a~vQVfegT~Gl~~~~t~vrF~g~~l~i~ 82 (463)
T COG1156 4 VKEYTTISEIKGPLIIVEGVE-GASYGELVEIETPDGEVRRGQVLEVRGDKAVVQVFEGTSGLDTKGTTVRFTGETLKIP 82 (463)
T ss_pred CCEEEEEEEECCCEEEEECCC-CCCCCEEEEEECCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCEEEEECCEEEEE
T ss_conf 420234677315449996456-7776437999879987643457531586489999504457788885589948637876
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
Q ss_conf 46668865430776304788777555301211254333000133110011124587520022358503752667889999
Q gi|254780684|r 97 PSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 (438)
Q Consensus 97 vG~~lLGRViD~lG~PlDg~~~l~~~~~~~~i~~~~p~p~~R~~i~e~L~TGIr~ID~l~pig~GQR~gIfg~~GvGKt~ 176 (438)
T Consensus 83 vs~dllGRifnG~G~PiDggp~i~~e~-~~dI~g~~~NP~aR~yP~efIqTgIsaIDg~NtLvrgQKlPIFSgSGlphN~ 161 (463)
T COG1156 83 VSEDLLGRIFNGSGKPIDGGPEIVPED-RLDINGAPINPYARIYPEEFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNE 161 (463)
T ss_pred ECHHHHHHHHCCCCCCCCCCCCCCCCC-CCCCCCCCCCCHHHHCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf 328766544057888478998678775-5335788789156547266765296087643465336546601279984379
Q ss_pred HHHHHHHHCCCCC------EEEEECCCCCHHHHHHHHHHHCC-CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH-HC
Q ss_conf 9999874078983------89931246522388999986427-7553289841577880344444456777888864-26
Q gi|254780684|r 177 LLSMFARSDCFDK------VIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SK 248 (438)
Q Consensus 177 Ll~~i~~~~~~dv------~V~alIGeR~rev~efi~~~~~~-~l~~tvvv~~t~d~~~~~r~~a~~~a~~iAEyfr-~~ 248 (438)
T Consensus 162 LaaqIarQA~v~~~~e~favVfaamGit~eea~fF~~~fe~tGal~r~vlflnlA~dp~vEri~tPr~aLt~AEylA~e~ 241 (463)
T COG1156 162 LAAQIARQATVDGEEEEFAVVFAAMGITHEEALFFMDEFEETGALDRAVLFLNLADDPAVERIITPRMALTVAEYLAFEK 241 (463)
T ss_pred HHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCC
T ss_conf 99999975366787543058874047318999999988876224666676542367874347613168999999985257
Q ss_pred CCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCHHHHHH
Q ss_conf 79889997098999999876654047784323663245542004444431136788523554333421676420278999
Q gi|254780684|r 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 (438)
Q Consensus 249 G~~Vll~~Ds~tr~a~A~reis~~~ge~P~~~gyp~~~~~~~~~l~ERag~~~~~~GSiT~~~~v~~~~dd~~~pi~~~~ 328 (438)
T Consensus 242 ~~hVLVilTDMTnyceALREIsaareeVPgrRGYPGymYTdLatiYErAg~i~g~~GSiTqipIlTMP~DDITHPIPDlT 321 (463)
T COG1156 242 DMHVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGRKGSITQIPILTMPGDDITHPIPDLT 321 (463)
T ss_pred CCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCEECCCCCCEEEEEEEECCCCCCCCCCCCCC
T ss_conf 86699997014678999999876414377767886166778899987650330578726987765269987678777655
Q ss_pred HHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCHHCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf 861260898704277589713114456400022120899-----999999999999999999999998523446999899
Q gi|254780684|r 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403 (438)
Q Consensus 329 ~~i~DG~i~L~r~la~~g~~Paid~~~S~SR~~~~~~~~-----~~~~~~~~~~~~l~~y~~~~~l~~~g~y~~g~d~~~ 403 (438)
T Consensus 322 GYITEGQivl~r~l~~~gIyPpi~vlpSLSRL~~~giG~g~TReDH~~~snql~a~YA~g~d~r~l~avvge~a-Ls~~D 400 (463)
T COG1156 322 GYITEGQIVLSRDLHRKGIYPPINVLPSLSRLMKDGIGEGKTREDHGDVSNQLYAAYAEGRDLRELVAVVGEEA-LSERD 400 (463)
T ss_pred CEECCCEEEEEHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH-CCHHH
T ss_conf 53316559997100248867972336127777651447886644107889999999850240899998752443-03357
Q ss_pred HHHHHHHHHHHH-HHCCCCCCCCCHHHHHHH
Q ss_conf 999999999999-835998889997689999
Q gi|254780684|r 404 DKAVHQVPIIYD-FLKQSPSDLSSEDVFQEI 433 (438)
Q Consensus 404 d~~i~~~~~i~~-fl~Q~~~e~~~~~~~~~~ 433 (438)
T Consensus 401 ~~~l~F~d~FE~~fi~qg~~enrsieetLdl 431 (463)
T COG1156 401 RKYLKFADLFEQRFIKQGRYENRSIEETLDL 431 (463)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 9999999999999986343247788999887