HHsearch alignment for GI: 254780684 and conserved domain: COG1474
>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].
Probab=94.05 E-value=0.5 Score=26.44 Aligned_cols=99 Identities=19% Similarity=0.340 Sum_probs=57.7
Q ss_pred HHHHHCCCCE---EEEECCCCCCHHHHHHHHHHH---CCCCC-EEEEECCCCCHHHHHHHHHHHCC-CCCCEEEEEECCC
Q ss_conf 2002235850---375266788999999998740---78983-89931246522388999986427-7553289841577
Q gi|254780684|r 154 IFTPLCHGQR---IGVFAGSGIGKSTLLSMFARS---DCFDK-VIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSD 225 (438)
Q Consensus 154 ~l~pig~GQR---~gIfg~~GvGKt~Ll~~i~~~---~~~dv-~V~alIGeR~rev~efi~~~~~~-~l~~tvvv~~t~d 225 (438)
T Consensus 32 ~l~~~~~~~~p~n~~iyG~~GTGKT~~~~~v~~~l~~~~~~~~~~yINc~~~-~t~~~i~~~i~~~~~------------ 98 (366)
T COG1474 32 FLAPALRGERPSNIIIYGPTGTGKTATVKFVMEELEESSANVEVVYINCLEL-RTPYQVLSKILNKLG------------ 98 (366)
T ss_pred HHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEC-CCHHHHHHHHHHHHC------------
T ss_conf 9999855899860799889998732899999999973315675799951307-878799999999826------------
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHH
Q ss_conf 8803444444567778888642679889997098999999
Q gi|254780684|r 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265 (438)
Q Consensus 226 ~~~~~r~~a~~~a~~iAEyfr~~G~~Vll~~Ds~tr~a~A 265 (438)
T Consensus 99 ~~p~~g~~~~~~~~~l~~~~~~~~~~~IvvLDEid~L~~~ 138 (366)
T COG1474 99 KVPLTGDSSLEILKRLYDNLSKKGKTVIVILDEVDALVDK 138 (366)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCC
T ss_conf 8997676326899999997774187599997647654154