HHsearch alignment for GI: 254780684 and conserved domain: KOG0735
>KOG0735 consensus.
Probab=94.05 E-value=0.22 Score=29.01 Aligned_cols=108 Identities=18% Similarity=0.290 Sum_probs=59.4
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCC---EEEEEC----CCCCHHHHHHHHHHHCCC--CCCEEE
Q ss_conf 45875200223585037526678899999999874078983---899312----465223889999864277--553289
Q gi|254780684|r 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLV----GERGREVREFIEDYLGDN--LKKSVV 219 (438)
Q Consensus 149 Ir~ID~l~pig~GQR~gIfg~~GvGKt~Ll~~i~~~~~~dv---~V~alI----GeR~rev~efi~~~~~~~--l~~tvv 219 (438)
T Consensus 419 e~~n~~~spv~~~~~Ill~G~~GsGKT~L~kal~~~~~k~~~~hv~~v~Cs~l~~~~~e~iQk~l~~vfse~~~~~PSiI 498 (952)
T KOG0735 419 ENANQELSPVFRHGNILLNGPKGSGKTNLVKALFDYYSKDLIAHVEIVSCSTLDGSSLEKIQKFLNNVFSEALWYAPSII 498 (952)
T ss_pred HHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 44323045433466189867998777699999998751565069999752210420489999999999999886378089
Q ss_pred EE-------E-CCCC----CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 84-------1-5778----8034444445677788886426798899970
Q gi|254780684|r 220 VV-------A-TSDE----SPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257 (438)
Q Consensus 220 v~-------~-t~d~----~~~~r~~a~~~a~~iAEyfr~~G~~Vll~~D 257 (438)
T Consensus 499 vLDdld~l~~~s~~e~~q~~~~~~rla~flnqvi~~y~~~~-~~ia~Iat 547 (952)
T KOG0735 499 VLDDLDCLASASSNENGQDGVVSERLAAFLNQVIKIYLKRN-RKIAVIAT 547 (952)
T ss_pred EECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEE
T ss_conf 97050354056844477302899999999999999987068-57999985