HHsearch alignment for GI: 254780684 and conserved domain: KOG4658

Probab=95.86  E-value=0.03  Score=35.36  Aligned_cols=102  Identities=22%  Similarity=0.246  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCC-----CCCEEEEECCCCCHHHHHHHHHHHCC-CC-CCE
Q ss_conf             111245875200223585037526678899999999874078-----98389931246522388999986427-75-532
Q gi|254780684|r  145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-----FDKVIISLVGERGREVREFIEDYLGD-NL-KKS  217 (438)
Q Consensus       145 L~TGIr~ID~l~pig~GQR~gIfg~~GvGKt~Ll~~i~~~~~-----~dv~V~alIGeR~rev~efi~~~~~~-~l-~~t  217 (438)
T Consensus       163 ~e~~~ekl~~~L~~d~~~ivgi~GMGGvGKTTL~~qi~N~~~~v~~~Fd~~iWV~VSk~-f~~~~iq~~Il~~l~~~~~-  240 (889)
T KOG4658         163 LETMLEKLWNRLMEDDVGIVGIYGMGGVGKTTLARQIFNKFDEVGNHFDGVIWVVVSKE-FTTRKIQQTILERLGLLDE-  240 (889)
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHHCCCCCEEEEEEECCC-CCHHHHHHHHHHHHCCCCC-
T ss_conf             88999999998404799689998897034999999984133122357874999997763-1088899999998446871-


Q ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHH
Q ss_conf             8984157788034444445677788886426798899970989
Q gi|254780684|r  218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT  260 (438)
Q Consensus       218 vvv~~t~d~~~~~r~~a~~~a~~iAEyfr~~G~~Vll~~Ds~t  260 (438)
T Consensus       241 -----~~~~~~~-----~~~~~~i~~~L--~~krfllvLDDIW  271 (889)
T KOG4658         241 -----EWEDKEE-----DELASKLLNLL--EGKRFLLVLDDIW  271 (889)
T ss_pred             -----CCCCCCH-----HHHHHHHHHHH--CCCCEEEEEECCC
T ss_conf             -----0001028-----89999999985--5685599982567